KEGG   Roseateles depolymerans: RD2015_3709
Entry
RD2015_3709       CDS       T04166                                 
Name
(GenBank) Ribonuclease PH
  KO
K00989  ribonuclease PH [EC:2.7.7.56]
Organism
rdp  Roseateles depolymerans
Brite
KEGG Orthology (KO) [BR:rdp00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:rdp03016]
    RD2015_3709
Enzymes [BR:rdp01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.56  tRNA nucleotidyltransferase
     RD2015_3709
Transfer RNA biogenesis [BR:rdp03016]
 Prokaryotic type
  3'processing and CCA adding factors
   3'processing factors
    RD2015_3709
SSDB
Motif
Pfam: RNase_PH RNase_PH_C
Other DBs
NCBI-ProteinID: ALV08163
UniProt: A0A0U3MYS6
Position
complement(4321115..4321846)
AA seq 243 aa
MTAIASRPQGRAADALRPVRITRHYTRHAEGAVLIEFGDTKVLCTASVEEKVPPHKKGSG
EGWVTAEYGMLPRATHTRSDREAARGKQTGRTQEIQRLIGRALRSVFDLKKLGERTIQLD
CDVLQADGGTRTAAITGAYVAAHDAVSWLLSQGKITQSPLLDAVAAISVGIKDGQALLDL
EYVEDSTCDTDMNVVMTGAGHFVELQGTAEGVAFTRAEVDVLLNLAEKGIRDLLVAQRQA
LGL
NT seq 732 nt   +upstreamnt  +downstreamnt
atgaccgccattgccagccgcccgcaagggcgcgcggccgacgccctgcgcccggttcgc
atcacccgccactacacccgccacgctgaaggcgcggtgctgatcgagttcggcgacacc
aaggtgctgtgcaccgcctccgtcgaagagaaggtgccgccgcacaagaagggctcgggc
gagggctgggtcaccgccgaatacggcatgctgccgcgtgccacccacacccgcagcgac
cgcgaagccgcccgtggcaagcagaccggccgcacgcaggaaatccagcgtctgatcggc
cgcgcgctgcgctcggtcttcgacttgaagaagctgggcgagcgcaccatccagctggac
tgcgacgtgctgcaggccgacgggggcacccgcaccgcagccatcaccggcgcctatgtg
gcggcgcatgatgcagtgagctggctgctgtcgcagggcaagatcacgcagtcgccgctg
ctggacgcggtggccgccatctccgtcggcatcaaggacggccaggcgctgctggatctg
gaatacgtggaagactccacctgcgacaccgacatgaatgtggtgatgaccggcgccggt
cacttcgtggaactgcagggcaccgccgaaggcgtggccttcacccgcgcggaagtggac
gtgctgctgaacctggccgagaagggcatccgcgacttgctggttgctcagcgacaggcc
ctgggtctttga

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Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   RefGene (2)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (2)   
   Pfam (2)   
All databases (13)   

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