KEGG   Planctopirus limnophila: Plim_2745
Entry
Plim_2745         CDS       T01225                                 
Name
(GenBank) ribonuclease PH
  KO
K00989  ribonuclease PH [EC:2.7.7.56]
Organism
plm  Planctopirus limnophila
Brite
KEGG Orthology (KO) [BR:plm00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:plm03016]
    Plim_2745
Enzymes [BR:plm01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.56  tRNA nucleotidyltransferase
     Plim_2745
Transfer RNA biogenesis [BR:plm03016]
 Prokaryotic type
  3'processing and CCA adding factors
   3'processing factors
    Plim_2745
SSDB
Motif
Pfam: RNase_PH RNase_PH_C F_bP_aldolase
Other DBs
NCBI-ProteinID: ADG68568
UniProt: D5SR75
Position
3560404..3561123
AA seq 239 aa
MRHDGRQPDELRPIRIQRQFTKVAPGSVLISAGDTTLLVTASIDETLPPWKAADPAAQKG
WLTAEYCMLPGSTSPRKRREREKVDGRSTEIQRLIGRSLRACVDFETLGPRTIMIDVEVL
QADGGTRTLGITGGYIALCDAIATLGDKVSKDRPVLTTSIAAVSVGISHGTPILDLDYIE
DSQAEVDLNVVMTGSGEFIEIQGTAEGRSFTRAQLDQQLALAEKGIRQLMELQQAALKG
NT seq 720 nt   +upstreamnt  +downstreamnt
atgagacatgatggtcgccagccagatgaactgcgtccgattcgaattcagcgtcagttc
accaaagttgcccctggcagtgtgctgatctcggctggtgacacaactttgctcgtgacc
gccagcatcgatgaaaccctgcctccgtggaaggcagccgatcctgcagctcaaaaaggc
tggctcactgccgagtactgcatgctccccggcagtacctctccccgcaaacgccgcgaa
cgcgaaaaggtcgatggccgctcgacagaaattcaaaggctcattggccgcagcttacgg
gcctgtgtcgattttgaaacactggggccgcgcacgatcatgatcgacgtggaagttctg
caggctgatggtggcacccgcactctgggtattaccggcggctacattgccctgtgcgat
gcgattgcgaccttaggtgataaggtttcaaaagaccgccctgtgctgaccacgtcgatt
gctgcagtcagtgtcgggatttcgcacgggacaccaatcctggatctcgattatattgaa
gacagccaggcagaggttgatctcaatgtggttatgacaggttcgggcgaattcatcgag
attcaagggacagccgaaggccgctcgtttacccgcgcgcagctggatcaacagcttgca
ctggctgagaaaggcattcgccaactcatggaactccagcaagcagcattgaagggctga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (7)   
   KEGG ORTHOLOGY (1)   
   RefGene (4)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (3)   
   Pfam (3)   
All databases (16)   

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