#=GF ID Phage-MuB_C
#=GF AC PF09077.16
#=GF DE Mu B transposition protein, C terminal
#=GF AU Sammut SJ;0000-0003-4472-904X
#=GF SE pdb_1f6v
#=GF GA 25.00 25.00;
#=GF TC 25.10 25.10;
#=GF NC 24.80 24.70;
#=GF BM hmmbuild HMM.ann SEED.ann
#=GF SM hmmsearch --cpu 4 -Z 81514348 -E 1000 HMM pfamseq
#=GF TP Domain
#=GF RN [1]
#=GF RM 11060014
#=GF RT The solution structure of the C-terminal domain of the Mu B
#=GF RT transposition protein.
#=GF RA Hung LH, Chaconas G, Shaw GS;
#=GF RL EMBO J. 2000;19:5625-5634.
#=GF DR INTERPRO; IPR009084;
#=GF DR SCOP; 1f6v; fa;
#=GF DR SO; 0000417; polypeptide_domain;
#=GF CC The C terminal domain of the B transposition protein from
#=GF CC Bacteriophage Mu comprises four alpha-helices arranged in a
#=GF CC loosely packed bundle, where helix alpha1 runs parallel to
#=GF CC alpha3, and anti-parallel to helices alpha2 and alpha4. The
#=GF CC domain allows for non-specific binding of Mu to double-stranded
#=GF CC DNA, allowing for integration into the bacterial genome, and
#=GF CC mediates dimerisation of the protein [1].
#=GF SQ 130
#=GS A0A4R1KJN5_9PAST/222-301 AC A0A4R1KJN5.1
#=GS A0A4R3NLK4_9HYPH/258-335 AC A0A4R3NLK4.1
#=GS A0A318SZJ9_9HYPH/242-318 AC A0A318SZJ9.1
#=GS TARGB_BPMU/223-300 AC P03763.1
#=GS TARGB_BPMU/223-300 DR PDB; 1F6V A; 2-79;
#=GS A0A8J7UK34_9HYPH/268-344 AC A0A8J7UK34.1
#=GS A0A1E1F2P4_9SPHN/234-312 AC A0A1E1F2P4.1
#=GS A0A285UXJ4_9HYPH/258-334 AC A0A285UXJ4.1
#=GS A0A550J2R4_9BACT/243-320 AC A0A550J2R4.1
#=GS H4F6X0_9HYPH/257-334 AC H4F6X0.1
#=GS B8GS43_THISH/242-319 AC B8GS43.1
#=GS A0A4R3N929_9GAMM/238-315 AC A0A4R3N929.1
#=GS A0A7W6EUG8_9SPHN/236-313 AC A0A7W6EUG8.1
#=GS I2BC29_SHIBC/226-303 AC I2BC29.1
#=GS A0A317PI72_9HYPH/265-341 AC A0A317PI72.1
#=GS A0A4Q5RTX7_9SPHN/318-394 AC A0A4Q5RTX7.1
#=GS K2IXQ7_9GAMM/231-308 AC K2IXQ7.1
#=GS M4M9P4_9CAUD/236-311 AC M4M9P4.1
#=GS A0A5K7Z2L6_9BACT/228-305 AC A0A5K7Z2L6.1
#=GS A0A8J3EBY3_9PROT/247-325 AC A0A8J3EBY3.1
#=GS A0A1Y5SYC0_9RHOB/247-321 AC A0A1Y5SYC0.1
#=GS A8LKK5_DINSH/173-248 AC A8LKK5.1
#=GS A0A502BLG3_9HYPH/1-44 AC A0A502BLG3.1
#=GS A0A8J7IR52_9RHOB/251-325 AC A0A8J7IR52.1
#=GS A0A3A1P1E7_9SPHN/230-306 AC A0A3A1P1E7.1
#=GS A0A7U4JAC6_9SPHN/235-313 AC A0A7U4JAC6.1
#=GS A0A3N4UQK4_9BURK/229-303 AC A0A3N4UQK4.1
#=GS A0A5S9R4R4_9HYPH/238-315 AC A0A5S9R4R4.1
#=GS A0A2P0B0F7_9SPHN/239-318 AC A0A2P0B0F7.1
#=GS A0A248KJ06_9ENTR/227-304 AC A0A248KJ06.1
#=GS A0A6P1NHM5_9PROT/231-308 AC A0A6P1NHM5.1
#=GS A0A6P1YPW6_9HYPH/238-315 AC A0A6P1YPW6.1
#=GS A0A1G6XKX6_9GAMM/244-321 AC A0A1G6XKX6.1
#=GS A0A5D0RL16_9RHOB/180-255 AC A0A5D0RL16.1
#=GS A0A0Q7YAJ9_9HYPH/256-332 AC A0A0Q7YAJ9.1
#=GS A0A081B6F7_9HYPH/239-316 AC A0A081B6F7.1
#=GS A0A4V2V4N1_9HYPH/258-335 AC A0A4V2V4N1.1
#=GS G6XKZ8_9PROT/212-290 AC G6XKZ8.1
#=GS W1IPJ6_9GAMM/236-312 AC W1IPJ6.1
#=GS A0A080M4X6_9PROT/300-347 AC A0A080M4X6.1
#=GS A0A2P9JZG8_9CAUD/237-314 AC A0A2P9JZG8.1
#=GS Q7VPI3_HAEDU/222-301 AC Q7VPI3.1
#=GS A0A6A7Y6T6_9HYPH/236-313 AC A0A6A7Y6T6.1
#=GS A0A285TWZ0_9HYPH/250-326 AC A0A285TWZ0.1
#=GS A0A4Q2R8I1_9HYPH/163-236 AC A0A4Q2R8I1.1
#=GS A0A1G8GKQ6_9PROT/236-313 AC A0A1G8GKQ6.1
#=GS A0A426FJ82_BIBTR/222-300 AC A0A426FJ82.1
#=GS VPB_HAEIN/222-276 AC P96343.1
#=GS A0A2P1PSW3_9GAMM/229-306 AC A0A2P1PSW3.1
#=GS A0A071M5D7_9ENTR/143-220 AC A0A071M5D7.1
#=GS A0A285M2H1_9HYPH/258-334 AC A0A285M2H1.1
#=GS A0A2U2CDT0_9RHOB/261-337 AC A0A2U2CDT0.1
#=GS U3U117_9ENTR/1-63 AC U3U117.1
#=GS A0A4V2UQI4_9PROT/223-297 AC A0A4V2UQI4.1
#=GS A0A7X2D561_9PROT/183-254 AC A0A7X2D561.1
#=GS A0A219VHC7_9CAUD/245-321 AC A0A219VHC7.1
#=GS A0A549T841_9HYPH/256-332 AC A0A549T841.1
#=GS A0A4R3NUJ7_9HYPH/259-335 AC A0A4R3NUJ7.1
#=GS A0A174QDT4_9FIRM/229-306 AC A0A174QDT4.1
#=GS A0A1E3VJU7_9HYPH/257-333 AC A0A1E3VJU7.1
#=GS A0A261QT94_9GAMM/224-302 AC A0A261QT94.1
#=GS V4NRA0_9CAUL/237-315 AC V4NRA0.1
#=GS H6SNB5_PARPM/228-305 AC H6SNB5.1
#=GS A0A6H0T9D9_9PAST/222-300 AC A0A6H0T9D9.1
#=GS A0A1C2DEK0_9HYPH/257-333 AC A0A1C2DEK0.1
#=GS D3V956_XENNA/236-312 AC D3V956.1
#=GS A0A975H3R5_9BURK/257-334 AC A0A975H3R5.1
#=GS A0A7W6RGX9_9PROT/230-308 AC A0A7W6RGX9.1
#=GS A0A8E7L2W1_9CAUD/223-304 AC A0A8E7L2W1.1
#=GS A0A8J7S5Q8_9PROT/235-312 AC A0A8J7S5Q8.1
#=GS A0A2R7IN45_9SPHN/236-312 AC A0A2R7IN45.1
#=GS A0A2X4U7Q8_9GAMM/232-309 AC A0A2X4U7Q8.1
#=GS A0A7S8HDN5_9HYPH/250-326 AC A0A7S8HDN5.1
#=GS E2CI33_9HYPH/261-338 AC E2CI33.1
#=GS B9JYV7_ALLAM/264-340 AC B9JYV7.1
#=GS A0A8D4J1S7_9PAST/222-301 AC A0A8D4J1S7.1
#=GS A0A7L5YEP9_9PROT/186-264 AC A0A7L5YEP9.1
#=GS A0A8G2BMW2_9PROT/241-317 AC A0A8G2BMW2.1
#=GS A0A1T0B6N4_9PAST/222-300 AC A0A1T0B6N4.1
#=GS Q8EDT8_SHEON/239-314 AC Q8EDT8.1
#=GS A0A6I4YXK7_9PROT/234-312 AC A0A6I4YXK7.1
#=GS A0A1Y6CWP7_9HYPH/237-313 AC A0A1Y6CWP7.1
#=GS A0A1U9Z2L3_9HYPH/259-335 AC A0A1U9Z2L3.1
#=GS A0A972FZA7_9RHOB/176-251 AC A0A972FZA7.1
#=GS A0A7W6NLS6_9HYPH/255-330 AC A0A7W6NLS6.1
#=GS A0A4R1FM79_9PAST/222-301 AC A0A4R1FM79.1
#=GS A0A7W6WJE7_9PROT/236-314 AC A0A7W6WJE7.1
#=GS A0A4Y6U8X7_9PROT/231-308 AC A0A4Y6U8X7.1
#=GS A0A5M8P7C1_9HYPH/256-332 AC A0A5M8P7C1.1
#=GS D5RM54_9PROT/238-316 AC D5RM54.1
#=GS A0A2Z4PZE1_9CAUD/222-301 AC A0A2Z4PZE1.1
#=GS A0A371X328_9HYPH/271-347 AC A0A371X328.1
#=GS A0A396RN67_9SPHN/234-311 AC A0A396RN67.1
#=GS A0A397P498_9SPHN/234-311 AC A0A397P498.1
#=GS A0A7Y6NP27_9BURK/273-348 AC A0A7Y6NP27.1
#=GS A0A8G2BMW4_9PROT/240-316 AC A0A8G2BMW4.1
#=GS A0A0P8YZP8_9RHOB/147-223 AC A0A0P8YZP8.1
#=GS A0A4R2KH03_9RHOB/172-247 AC A0A4R2KH03.1
#=GS B8FGN5_DESAL/239-316 AC B8FGN5.1
#=GS A0A1I2G4E8_9PROT/310-375 AC A0A1I2G4E8.1
#=GS A7INZ9_XANP2/232-310 AC A7INZ9.1
#=GS A0A1V0PQE2_9RHOB/179-256 AC A0A1V0PQE2.1
#=GS A0A1T4R0D1_9GAMM/234-310 AC A0A1T4R0D1.1
#=GS A0A2W6MS23_9HELI/223-304 AC A0A2W6MS23.1
#=GS T0IT41_9SPHN/234-312 AC T0IT41.1
#=GS A0A6I4Z0N6_9PROT/226-303 AC A0A6I4Z0N6.1
#=GS A0A0D5LWN7_MAREN/257-333 AC A0A0D5LWN7.1
#=GS A9D2U3_HOEPD/271-347 AC A9D2U3.1
#=GS F1YR56_9PROT/231-309 AC F1YR56.1
#=GS A0A0Q8ANK8_9HYPH/266-342 AC A0A0Q8ANK8.1
#=GS TARGB_BPD10/223-300 AC P13771.2
#=GS B9JYF2_ALLAM/260-336 AC B9JYF2.1
#=GS A0A7W6GBD9_9HYPH/258-334 AC A0A7W6GBD9.1
#=GS A0A0B3RY51_9RHOB/185-260 AC A0A0B3RY51.1
#=GS A0A2U2N196_9GAMM/262-336 AC A0A2U2N196.1
#=GS A0A0F5P8Y7_9SPHN/232-308 AC A0A0F5P8Y7.1
#=GS A0A377HRW9_9PAST/230-308 AC A0A377HRW9.1
#=GS A0A238L768_9RHOB/173-248 AC A0A238L768.1
#=GS A0A930SW19_9BACT/233-310 AC A0A930SW19.1
#=GS A0A977LI99_9CAUD/240-318 AC A0A977LI99.1
#=GS A0A2U2C8F4_9RHOB/318-396 AC A0A2U2C8F4.1
#=GS A0A0H3JR81_ECO57/223-300 AC A0A0H3JR81.1
#=GS A0A378BYH9_KLEPO/226-268 AC A0A378BYH9.1
#=GS A0A7S8C726_9HYPH/250-326 AC A0A7S8C726.1
#=GS A0A2U2DFH9_9HYPH/262-338 AC A0A2U2DFH9.1
#=GS A0A6N1XAG7_9RHOO/230-307 AC A0A6N1XAG7.1
#=GS A0A0P7KPJ3_9RHOB/255-331 AC A0A0P7KPJ3.1
#=GS Q1JYS0_DESA6/244-321 AC Q1JYS0.1
#=GS A0A5S9R6U1_9HYPH/238-315 AC A0A5S9R6U1.1
#=GS A0A7X5J7I7_9HYPH/259-336 AC A0A7X5J7I7.1
#=GS A0A285UN08_9HYPH/258-334 AC A0A285UN08.1
A0A4R1KJN5_9PAST/222-301 ....................SRI.GKHYEIKASRK.DDIKAIVAAWGLdtTDKDLMKVAC..EIGG.KA..G..SLRILTQYLRLAGITAKGQG.TAI.TLELILQAQAQM..................
A0A4R3NLK4_9HYPH/258-335 ....................SRI.DKRLRREGNRA.DDIRLFVAALGI..EDPDCIKFLL..GLGL.KP..G..ALRQIDRTVKLARMYAMGEG.LPL.SLDHLRAAWKN-r.................
A0A318SZJ9_9HYPH/242-318 ...................r-RI.FKRIRRDKPNP.ADLTAFIAAWGI..TDPKQMEFLT..GVGM.KP..G..ALGQVDMTVKLARMAAQGAQ.RDM.TLNDLRAAWA--n.................
TARGB_BPMU/223-300 ....................SRI.AKRTAINKTKK.ADVKAIADAWQI..NGEKELELLQ..QIAQ.KP..G..ALRILNHSLRLAAMTAHGKG.ERV.NEDYLRQAFREL..................
#=GR TARGB_BPMU/223-300 SS ....................---.--TT--SS-SG.GGTTHHHHSSSS..SSSHHHHHHH..TTSS.S-..S..-HHHHHHHHGGGT-TT-TTS.--S.SHHHHHHHHTSS..................
A0A8J7UK34_9HYPH/268-344 ...................r-RI.GKRLQRTRPHE.EDLRAFISAWNV..SDPEAVKFLI..GIGK.KG..G..ALGQIDKTMKLAVMYATGRG.ETV.ARQHIEAAWK--n.................
A0A1E1F2P4_9SPHN/234-312 ....................SRI.AQRVVQAQPQE.GDVLAFCDAWKL..FDPGIRQTLI..DVAL.RP..GsgALRECRQIIVNASRIASEDG.GRL.QLAHVRWAI---er................
A0A285UXJ4_9HYPH/258-334 ....................SRI.DKNLKRDPGLG.ADIRTFIEAWGV..TDPSCVKTLV..GIGQ.KG..G..ALRQIDRTIKMACLATQRRA.SEL.ERKHLEAAWA--n.................
A0A550J2R4_9BACT/243-320 ....................SRL.GKRLRLTKAAP.GDVDAMADAFGV..MGTAERRFLA..GIAS.KP..G..ALRGVVKTLRLASVFAAGKG.ESL.TVDHLNAAWHDL..................
H4F6X0_9HYPH/257-334 ...................t-RF.DRRLKREKDPV.QDAAMLIRAWGI..EEKDCVTFLH..GIAT.KP..G..ALRNIDRTIKAAMMAALGNG.EEL.TMNYLVASWR--nr................
B8GS43_THISH/242-319 ....................SRQ.GKWVGIQKTTA.KDIAALVAAWHI..DDSRVMDAAQ..EIGS.RP..G..GLRGLTKALRLASMFAAGEG.GAM.QREHLVQAWRDL..................
A0A4R3N929_9GAMM/238-315 ....................SRI.GRRLRVQRVVR.DDVAALAAAHGV..EEAAALRRLV..EIGG.QA..G..ALRAVGKTLRLARMMAAGQG.TEL.GADHIAAAWADL..................
A0A7W6EUG8_9SPHN/236-313 ....................SRV.SMRLIRPLPLQ.ADADALAEAWKV..EDDAAQAYLR..KIVM.MP..G..GLRGGTMALELAWMIAASER.QPL.AKEHLQDAWAQL..................
I2BC29_SHIBC/226-303 ....................SRI.AKRVAINKTKK.ADVTAIADAWHI..TGEKERDLLQ..QIAQ.KP..G..ALRILSHSLRLAAMTAHGAG.HEV.SEGYIRKALRDL..................
A0A317PI72_9HYPH/265-341 ...................r-RI.GKRVRLAKPRA.EDINALLDAWGI..SEPDTRKVLT..GIGM.KD..G..ALGQIDKTLKLASMTAAATG.QAV.NAAMVRAAWS--n.................
A0A4Q5RTX7_9SPHN/318-394 ....................SRV.AQRVIAYHAVE.GDVLALADAWRI..QDEDMRRFLL..GLRQ.VP..G..SLRTLTFMLESAWMLASGDG.KPL.SLSYLQEGWA--l.................
K2IXQ7_9GAMM/231-308 ....................SRI.AKKMGVHKAKQ.TDVKAIAAAWGI..SGNGELALLQ..QIAE.RP..G..ALRILNQTLRLAAMLAGGSD.QSL.GEQHIRAAFKDL..................
M4M9P4_9CAUD/236-311 ....................SRI.AKKRGIHKTKQ.ADVRAIADAWNV..NGESERGLML..QISE.RP..G..GLRLLSKTLKLAAMFAKGQT.--I.SEQVLRKAFAEL..................
A0A5K7Z2L6_9BACT/228-305 ....................SRI.GKRLRIVRPLK.ADVLGVAKAFGV..EGSKAQQAAW..EIGR.KP..G..GLRGVVKTLRIAGVLAAGAG.KDI.DETFIKAAWLDL..................
A0A8J3EBY3_9PROT/247-325 ....................SRV.GMRLARPRPQR.GDIEALLDAWGV..AGKGERGLLQ..VIAR.KP..G..ALRNLTKVLRVAHMLAGGEG.AAAvAEAHIRMAWER-l.................
A0A1Y5SYC0_9RHOB/247-321 ....................SRI.GMRLFIPRPTV.GDVKSLAAAWGV..KGSPEIELLK..EVAA.EP..G..ALRGASKVLALAAMASGGD-.--I.TLAALRQARA--nl................
A8LKK5_DINSH/173-248 ...................r-RM.VRPVVIRSVPK.PDVLAVVRSRGI..TDPAICDALS..VMAR.RY..G..GLADVQRTLAQAAKHASSDK.I--.AASDVKAAM---lyl...............
A0A502BLG3_9HYPH/1-44 ................mlgt---.-----------.------------..----------..--GM.KG..D..VLRQIDKTIKLASMGAHGNG.HEV.TLSYVKKAWT--im................
A0A8J7IR52_9RHOB/251-325 ...................r-RR.GRSLQIMQPDP.ADAEMLLNAWKV..KDPEVRRVAA..LVAS.KQ..G..HFGSMTETLKSAAMVARGNG.RAI.TADDIRD-----gy................
A0A3A1P1E7_9SPHN/230-306 ..................rr--R.MRPIVWERPFA.KDVEALADAWNV..TDPKCVKFLG..EIAE.MG..G..GLGNPTETLCEALLISRSQS.RPL.EVADLKEAW---vr................
A0A7U4JAC6_9SPHN/235-313 ....................SRI.AMDHHQDMPRP.EDVSVYLDNAGI..ESDDVRQLLSrrALAR.DS..G..GLREIQKVIELAHKLAIGED.TVV.ADQHFRDAL---qv................
A0A3N4UQK4_9BURK/229-303 ....................SRI.GKRVSLRRAQD.ADIEAVAKAAGG..--EAW-REVM..EIGR.QP..G..AIRAVVKVLRLARMMAQAAG.EAL.AAAHVAAARRDL..................
A0A5S9R4R4_9HYPH/238-315 ....................SRV.GMRKAQVGAKA.KDVCLIIEKWGI..TEDPVVRMLK..TIAR.KP..G..ALRIMGKVIKLATMISGGGV.KDI.TTNHIERAWTQL..................
A0A2P0B0F7_9SPHN/239-318 ...................r-RI.SHRHIQKVPTE.GDVETFCDAWGI..KQGDMRGYLR..RIAL.TPhaG..GLGECQQLIEAASLIADGED.REFlSVTDLRDAQ---ma................
A0A248KJ06_9ENTR/227-304 ....................SRV.AKKIVINNVLA.ADVDAFCDAWKV..DGRDERKLLR..AIAK.RP..G..ALRSLSHILPLAHIYASGKS.EPV.NSGHIHSAMLEL..................
A0A6P1NHM5_9PROT/231-308 ....................SRV.GMWKARTKPLK.TDLEQLKDAWGV..TNPELDKLLF..WIGS.RE..G..GLRELSKTLRFAYFIAGSEGrTEL.QASDIEAGWT--q.................
A0A6P1YPW6_9HYPH/238-315 ....................SRV.GMRKVQSGAKI.KDVCLILAAWGI..TDAQSIALLK..AIAR.KP..G..ALRVMAKVIRLASMLAGASA.ADI.TKAHVERAWAQL..................
A0A1G6XKX6_9GAMM/244-321 ...................g-RI.GKRLHLARPTL.EDADALAEAWGI..EDSKARQLAA..TIAS.QP..G..GLRTLTKGLRGAATVAAQQG.APV.AFSHLHAAWQDL..................
A0A5D0RL16_9RHOB/180-255 .................sgq---.CRRLVVRTIER.GDVEAVAAQRGV..SDAASVEALY..QVSR.RE..G..GLGYVETITSHAARLAGGGR.--I.EPKHVLAAIE--yl................
A0A0Q7YAJ9_9HYPH/256-332 ...................r-RI.GKHLKRQKPYA.EDIASYIAAWGI..SDPDSVKLLT..GIGL.KG..G..ALGQIDKTMKLATMIAIGED.RDV.TVKDIEAAWK--n.................
A0A081B6F7_9HYPH/239-316 ....................SRV.GVRVTQARPKA.KDICAIIDAWKI..TEDEEVRLLK..AIGR.KP..G..ALRGLTKCLQLATVLASGEG.EER.NLKHIKAAFER-l.................
A0A4V2V4N1_9HYPH/258-335 ....................SRF.DKRLRREGNRA.EDIRLFVAALGI..DDPDCIKFLL..GLGL.KP..G..ALRQIDRTVKLARMYAMGEA.QPL.SLDHLKAAWKN-r.................
G6XKZ8_9PROT/212-290 ....................SRI.GMRKNRKQPQV.KDTRAIFDAWGI..DDANLFQLCR..WIAG.QP..G..GLRSMNKTLRYAWMIAASDE.RNQiTERDIQSAWSSL..................
W1IPJ6_9GAMM/236-312 ....................SRI.AKKVAILKTKK.DDVQAISAAWGL..-GQQERALVH..QLAE.RP..G..ALRTVSHTLRLAAMFASGAN.ESL.SEKHIRAAVKDL..................
A0A080M4X6_9PROT/300-347 ................lpal---.---------TR.EDVLTVAAAWGV..TGVEERAYCL..KAAA.QP..G..ALRNLSNIFRL---------.---.------------sl................
A0A2P9JZG8_9CAUD/237-314 ....................SRV.SKRVRLSKPQD.ADIAAILDAWGI..TDKQSRKFCL..AIGK.RP..G..ALRGLSQTLRLATLFANNVG.EPL.SLQIIRDAWTDL..................
Q7VPI3_HAEDU/222-301 ....................NRI.GKKCQIKASKK.GDIKAVAQAWGLdvQDKDLMTVLY..DIGG.KA..G..GLRALTQYLRLAGMTAKGQG.TGI.TLDLILTAQAEM..................
A0A6A7Y6T6_9HYPH/236-313 ....................SRV.GMRIVQPKPRA.GDICALIRAWGI..ESERETALLK..AIAR.KH..G..ALRALTKTVRLASMLAAGAE.QPL.SDRHIRLAWSQL..................
A0A285TWZ0_9HYPH/250-326 ...................r-RV.GKRIERLTPAA.ADVEAFIDAWRV..EDAEARKLLQ..AIGR.KP..G..ALGQIDKTMRLAGIFAMGSG.EQV.AAEHIRAAWND-..................
A0A4Q2R8I1_9HYPH/163-236 ...................d-RI.WKTVRLGDPVA.EDFAAFAAACNI..ADKTTRDALV..QLGL.KT..-..SLRHVTQVLQAALKIG-GAE.API.ELADLREA----eg................
A0A1G8GKQ6_9PROT/236-313 ....................SRV.GMRLTKTKPSR.ADVAALIEAWKI..AGDEERQFLT..GIAH.KP..G..ALRQMTKTIRLACVAAAGDG.SAV.TIEHLRTAY---grl...............
A0A426FJ82_BIBTR/222-300 ....................SRV.AKNTSIQRTKQ.ADTKAVAQAWGL.dDDQEALKVMQ..SITE.TG..G..GLRILTQTLRLAGMVAKGSN.KLI.TADLIIKARQEL..................
VPB_HAEIN/222-276 ....................SRV.AKNTSIQKTKK.ADTQAVAQAWGL.eTDEEALKVMQ..SITE.TG..G..GLRILTQT------------.---.------------yac...............
A0A2P1PSW3_9GAMM/229-306 ....................SRI.GKKVRLLRSTH.GDIDALVGAWNI..KDKACAAQLT..EIGS.KP..G..ALRILTKVLRLASMYATAQQ.RAM.CCDDIRAAWLDL..................
A0A071M5D7_9ENTR/143-220 ....................SRV.AKKVVINNIKA.GDVDAFCDAWNV..AGKDERQLLK..AIAK.RP..G..ALRSLSHILPLAHIYASGKG.EPV.NTGHIHSAMLEL..................
A0A285M2H1_9HYPH/258-334 ...................r-RI.GKRVRKSEPMA.EDIEMILDGWGV..TDPDVRRVLV..GIGR.KE..G..ALGQIDKTLKLATMTANGEG.KPV.TAELVKRAWA--n.................
A0A2U2CDT0_9RHOB/261-337 ....................SRI.GLRILQRVPMA.GDVEAILDAWKI..TDPEIRKLAT..AISR.KP..G..ALRQVDRALKLANMVAIGAG.TAM.TADHLKQAWA--n.................
U3U117_9ENTR/1-63 ...................m---.-----------.---AAIAAAWGI..TGESELTLVQ..AIAQ.KA..G..ALRVLSHTLRQAWLMASGDA.QAQlGEKYIKAAFRE-v.................
A0A4V2UQI4_9PROT/223-297 ....................SRI.GKRVSLRRATD.ADIEAVAKAAGG..---EAWGVVR..DVGR.QA..G..ALRAVVKVLRLARMMAQAAG.ESL.TAAHVQAARRDL..................
A0A7X2D561_9PROT/183-254 ...................g-RI.GAKLDLSAPKA.ADVEALCAHHGI..DGKRAVALVK..KAAQ.LP..G..ALQKVRNLFGVARELGDGAI.---.------------tlktledaa.........
A0A219VHC7_9CAUD/245-321 ....................SRI.GKRLNYAKPHK.EDLLAFIEAWDV..TDKPTVELLL..GIGM.KG..G..ALRQIDKTMRLANEVAQGLG.MSV.TYDIIKKAWE--n.................
A0A549T841_9HYPH/256-332 ...................r-RV.SKHLKRQKPYT.EDIAAYIRAWGV..TDPDSVKLLT..GIGL.KA..G..ALGQIEKTMKLATMFAMGDD.REV.TVRDIEAAWK--n.................
A0A4R3NUJ7_9HYPH/259-335 ...................r-RI.GKRLNRQKPLK.QDLETFIAAWGV..SDPAAIKLLA..GIGS.KG..G..ALGQIDKTMKLAAMLALGRG.EDV.GVKHIETAWR--n.................
A0A174QDT4_9FIRM/229-306 ....................SRV.VYKCPLNNCYTlEDIASIYAGVNI..-NRECMQYLY..QISK.RK..G..GLRLMVNQCKIAQNLAAALN.EDF.SMKHLEKAA---vrm...............
A0A1E3VJU7_9HYPH/257-333 ...................r-RV.GMRFRRMDPTA.GDVAAIVDAWGI..TDEAIVKLCR..GIGM.KP..G..ALSQISKTLQLAWMYAAGER.REL.AAADVRRAWEE-..................
A0A261QT94_9GAMM/224-302 ....................SRI.ARSKRLLKAKK.ADVAAIAAAWGI..TGESELTLVQ..AIAQ.KA..G..ALRVLSHTLRQAWLMASGDA.QAQlGEKYIKAAFRE-v.................
V4NRA0_9CAUL/237-315 ...................r-RT.ASRVTIDVPDT.ADVNALLDAWGV..TDSAMRSFMA..EIGL.MPglG..ALGAMTTVLEYASMMARQAE.QPL.NIGFIQHAA---ah................
H6SNB5_PARPM/228-305 ....................SRL.GRRVTLGKPSR.PDVSALASGFGI..TGREEADLLY..SLSQ.YP..G..GLRCVVKVIRLALLTALGTD.TPA.SMKRLAAAWSEL..................
A0A6H0T9D9_9PAST/222-300 ....................SRI.AKNTSIQKTKQ.ADTKAVATAWGL.nEDSEALKVMQ..AITE.TG..G..GLRILTQTLRLAGMVAKGTD.SLI.TADLISKARAEL..................
A0A1C2DEK0_9HYPH/257-333 ...................r-RF.GKRLYKMQPYP.EDIAMIIDAWCI..QDTDQRTLLT..GIGR.KP..G..HLGQIDKTLRIAHLLAAGEQ.ADL.ALKHIQAAYQ--n.................
D3V956_XENNA/236-312 ....................SRI.AKKVAILKTKK.DDVQAISAAWGL..-GQQERALVH..QLAE.RP..G..ALRTVSHTLRLAAMFARGAN.ETL.SETHIRAAVKDL..................
A0A975H3R5_9BURK/257-334 ....................SRL.GRRLRLSLPSE.GDIDAVLNAWDI..TGRAERAYAA..QIAC.LP..G..GLRGLFNLLEEARLAAKGMG.QPV.DVRLMRMAWADL..................
A0A7W6RGX9_9PROT/230-308 ....................SRV.GMRMVSAKPKP.GDAPALLDAWAV..TAEDCRDFLR..RIAQ.KP..G..ALRGMVKTMRVAAMLATGAG.AEIpDITHYKAAWAR-l.................
A0A8E7L2W1_9CAUD/223-304 .srigakwelkglcyqnkeg---.--------LKN.EDLKTLCSYFNI..EDKKAIDLVF..NLAR.--..G..NFRKSEKLLKRACEFADGKA.--V.ELKHIEAAA---sfl...............
A0A8J7S5Q8_9PROT/235-312 ....................SRI.GGRVVINKLRK.ADIEAIADAWNV..TDPQERGFLH..RIGG.RP..G..ALRNITKTMRLAGLLAQGAE.EPR.AIGHIQQAWRQL..................
A0A2R7IN45_9SPHN/236-312 ....................SRV.GNYMIAYGPEP.GDAQALASAWNV..SDAAQVAYLE..KIAA.MP..G..TLRTCTYVLETAAMMAASAE.SPI.SLALLREAWS--s.................
A0A2X4U7Q8_9GAMM/232-309 ....................SRI.AKKIVIEGVLA.GDVDAIADAWQL..TGDKERRLIR..QLAA.KS..G..ALRTVSTTLDLAAIIAQGTG.EAL.SERHIRAAVKDL..................
A0A7S8HDN5_9HYPH/250-326 ...................g-RI.GKRMRRLQPLA.GDVDDLIAAWGI..EDEKVAKVAR..ALGR.KP..G..ALRQITKTLQLAGMYAAGED.RTV.TVADIKAAWAD-..................
E2CI33_9HYPH/261-338 ....................SRF.GKRISREKPYP.EDINMFIKAWDI..EEPKAVAMLR..GIAR.KG..G..ALRQIDKTMKLASMLAIGDG.SNLvSVEHIEQAWT--n.................
B9JYV7_ALLAM/264-340 ....................SRI.GKRLQRVQPYP.EDLQTYIAAWSV..TDPACIKFLM..GIGM.KG..G..AFRQIEKTMRMARMVATGEG.TEV.SLKFIQAAWK--n.................
A0A8D4J1S7_9PAST/222-301 ....................SRI.GKNTSIQKCKK.ADIKAIANAWNLdtTDTDLMNTLY..QIGS.VA..G..GLRSLTQYLRLAGFIAKGEN.KLI.TLDLILSAKQQM..................
A0A7L5YEP9_9PROT/186-264 ....................SRV.GMRMPIPLPTE.GDALETLKAWGI.gTGKDEVEYAT..RIVK.GX..G..GLRALTQVLRQAALIARDKN.WII.DVRVMRAASTN-l.................
A0A8G2BMW2_9PROT/241-317 ...................r-RI.GVRRGIKKAGK.SDLKALVEAWGL..ADEESIRLLA..EIAA.RP..G..ALGVATKCIRLAAIDASGID.N-I.TAEHIRGAWSNL..................
A0A1T0B6N4_9PAST/222-300 ....................SRN.SKRTSIQKVKK.KDVVAVAKAWGL.aEDEDALKVMQ..AITE.TG..G..GLRILTQTLRLAGMVAKGSN.RLI.DANLITQARAEL..................
Q8EDT8_SHEON/239-314 ....................SRI.AKKLSINKTKQ.ADVRAIAKAWNL..QHDAEISLMI..QISE.KP..G..GLRLLSKTLKLAAMFAKGAA.I--.TEALLRTAFNEL..................
A0A6I4YXK7_9PROT/234-312 ....................SRI.GIRKDRKKCSR.GDVEALLNAWQL..ENQNLRLLVT..AIAS.QQ..G..ALRTMNKVLRYAVQLCRADHrDEL.SLDDVQSAWKEL..................
A0A1Y6CWP7_9HYPH/237-313 ....................SRV.GMVLTQPGPRE.RDICTIVQAWGI..VDPEEQSFLK..AIAE.KP..G..ALRAMVFTLRMATMLAGGAE.S-R.KLEHLREAFRR-l.................
A0A1U9Z2L3_9HYPH/259-335 ...................r-RI.GKRLNRRQPLR.QDLEAFIDAWGV..TDPVAVKTLI..GMGL.KG..G..ALGQIDKTLKLAAMLAMAND.EPI.NARHVETAWK--n.................
A0A972FZA7_9RHOB/176-251 ....................SRL.MRPVVIRQVSR.ADVAAVVDSTAL..ADVRSIDALH..AIAR.MQ..G..GLRNVENVIRIATLFAGDKM.--P.GHEHLKAAIIDM..................
A0A7W6NLS6_9HYPH/255-330 ....................SRI.GKRLLIDNPYT.EDLVRYIHAWGN..FSDDVVEYLV..GIGL.KG..G..ALRQIEKTVKLAMML-LGED.DTL.TVKHVATAWK--n.................
A0A4R1FM79_9PAST/222-301 ....................SRI.GNHCHVKASTK.KDIQAIAQAWDIniEDKDFMTVLY..DIGT.KA..G..GLRALTQYLRLAGIAAKGNG.TLI.TLDLVLQAQAQM..................
A0A7W6WJE7_9PROT/236-314 ....................SRV.GMRMVQAKPRA.GDATALLDAWGI..EAKDSRDFLA..RVAA.KP..G..ALRGMVKTMRVAAMLATGAG.AETpDITHYKAAWSR-l.................
A0A4Y6U8X7_9PROT/231-308 ....................SRV.GMFKSRSRPSV.HDLNKMITAWGV..DDSAVRQALQ..WIGL.RE..G..GLREVTKTLRYACLLALTDG.RDKpALQDIEASWTE-..................
A0A5M8P7C1_9HYPH/256-332 ....................SRV.AKRLNRKQPHL.ADLRARIAAWGV..HDAPAIKFLE..GVGL.KA..G..AIRQIDKTLMLAGMAAAGAG.AVL.DLAHIKAAWD--n.................
D5RM54_9PROT/238-316 ....................SRL.GMRIRKVRPTP.GDIDAVLNAWKV..EDQQSRRVLH..VIGK.RP..G..ALRNVVKTLKLAHIRASGDGlTEI.SAPMLDWAWSR-l.................
A0A2Z4PZE1_9CAUD/222-301 ....................SRI.GNNCGLKASTK.GDIKAIATAWGLdvTDNDLMTVLY..DIGG.KA..G..GLRALTQYLRLAGMTAKGQG.TVI.TLELILQAQAQM..................
A0A371X328_9HYPH/271-347 ....................SRI.FKRMRKTTPTI.PDIEAFLGAWKI..TEKDQVRFLT..GVGK.KP..G..ALRQIDMTIRLAKMMALGSG.REI.TLADLKAAWT--n.................
A0A396RN67_9SPHN/234-311 ....................SRV.ANRFIARGPME.GDAAALADAWRV..DAADQRGFLA..DVAK.RP..G..ALRTCTMVMETAHMLAAAEN.DAL.KLAHLQDAWSHL..................
A0A397P498_9SPHN/234-311 ....................SRV.GMRLVRNVPLA.ADARALAEAWGL..EDAKEIAFIQ..SIAT.KP..G..GLRGCTMVLELATMIAGGEH.RAR.DLAHMQDAWAQL..................
A0A7Y6NP27_9BURK/273-348 ....................SRI.GWRLPLRGPTA.ADVDAILDAWKV..PGAAEHDVAR..RIAS.KP..G..GLRGLFQVLRQARIAAAGAP.--V.TAQLMSMAWRDL..................
A0A8G2BMW4_9PROT/240-316 ....................SRV.GGRRYIPRPTI.GDVRAQIEAWGV..LNPDCITYAE..EVAA.KP..G..ALRLVNKVLRRAVMHAGGVE.-RI.ELQHLQAAWANL..................
A0A0P8YZP8_9RHOB/147-223 ...................r-RV.MARTTAMKVYE.EDIPTFLDAWGL..EDSALRTAAT..IILK.KP..G..AYGSLTETLVAASMIARGNN.RSL.TVDDLRAAYR--r.................
A0A4R2KH03_9RHOB/172-247 ................rrth---.-PRVTISHATE.ADVDLYCRARGL..HDDATIRKLA..DIAR.RN..G..GLGDVEDIFATARDL-----.---.------------gktgvptvedilaaleyl
B8FGN5_DESAL/239-316 ....................SRI.GRKLRLKKPSE.NDIKAICQAMGV..TEPMAQKYCV..EIAH.KP..E..AMRGMIETIQVAALFANGAG.QEL.GLKHIKAAWKD-r.................
A0A1I2G4E8_9PROT/310-375 ...............srilp---.---IKAKKPTE.NDIDLIMSTWGV..SGKSEREISL..KLGT.GD..G..GLRTLTDAYRLA--------.---.------------lhkydeitytsi......
A7INZ9_XANP2/232-310 ....................SRV.GARFVGASAKA.RDIEMLIAAWGV..TDEGVTKVLR..AIAR.KP..G..ALRLVGKTIRAASMYAEAEE.IGQiSATHIRQAWSQL..................
A0A1V0PQE2_9RHOB/179-256 ....................SRM.LRPVIVTEVSR.ADVAALVEGTPY..AIGPAVDALH..SVAR.MA..H..GLRSVEIAVSAALSSATGKG.EHP.TLAHLKGAIIDM..................
A0A1T4R0D1_9GAMM/234-310 ....................SRI.GKRVKLTVPSQ.ADVESLASAWGV..-GAKETHLLK..EIAA.KP..G..ALRGVTKALRLASMFAKGAD.DRL.STDYIKAAWTEL..................
A0A2W6MS23_9HELI/223-304 srigakwelkglcyqnkegl---.---------RD.EDLKTLCKHFGI..EDKKAIDLVF..NLAR.--..G..NFRKSEKLLKRAKDFADGSK.--V.ELRHIEAAA---sfl...............
T0IT41_9SPHN/234-312 ....................SRI.SKRIVQDRPEE.GDVTAFCDAWKL..FDPGIRKLLM..DVAL.MPgsG..ALREIRQIIENASMAASEDG.GKL.ELAHVRWAVED-..................
A0A6I4Z0N6_9PROT/226-303 ....................SRV.GMWKNRRKPTK.GDLDHMLSQWGT..MESDVSTLLR..WIGS.QE..G..GLRELNKTLRFAWFIASNDG.RDSlRISDIEMGWN--e.................
A0A0D5LWN7_MAREN/257-333 ...................r-RI.GKRLNRRQPLR.QDLEAFIDAWGV..TDPVAVKTLI..GMGL.KG..G..ALGQIDKTLKLAAMLAMAND.EPI.NARHVETAWK--n.................
A9D2U3_HOEPD/271-347 ...................r-RI.GKRVRLAKPRA.EDINALLDAWAI..TDPDTRKVLT..GIGM.KD..G..ALGQIDKTLKLASMTAAANG.KPV.DAAAVRAAWS--n.................
F1YR56_9PROT/231-309 ....................SRI.GLRRKINKPRS.RDMCEILKAWNI..QNEEVLMYAK..EIGR.RE..G..GLRSMTKVLRNATKIARVND.RNQiNKRDLELAWG--eh................
A0A0Q8ANK8_9HYPH/266-342 ...................r-RI.GKRLLRNKPYM.DDLRTFISAWGV..SDPDAVKFLI..GVGN.KG..G..ALGQIDKTVKLASMLATGCG.EPI.SLKHLQGAWK--n.................
TARGB_BPD10/223-300 ....................SRI.AKRTAINKTKK.ADVKAIADAWQI..NGENELELLQ..QIAQ.KP..G..ALRILNHSLRLAAMTAHGKG.ERV.NEDYLRQAFREL..................
B9JYF2_ALLAM/260-336 ....................SRI.GKRLQRVQPYP.DDLQTYIAAWNV..TDPACIKFLM..GIGL.KG..G..AFRQIEKTMRMALMVALGAG.TEV.GLKDIQAAWK--n.................
A0A7W6GBD9_9HYPH/258-334 ....................SRI.DKNLKRDPGRE.ADVKSFIEAWDI..TDAACVKFLL..GVGM.KG..G..ALRQIDRTIKMACLATQKPA.RDL.ERKHLEAAWN--n.................
A0A0B3RY51_9RHOB/185-260 ....................SRI.IRPVVIPHVSR.ADLAAVLEGTAF..MQSEMINTLH..KMCV.LK..G..GLRHVEKVTRHAQRFAGGAT.P--.TLAHLEAAISDM..................
A0A2U2N196_9GAMM/262-336 ....................SRI.SKRVRLGRPKD.GDVDALLDAWGI..DEREARQLAH..HIAR.RP..G..ALRGLTQTLSMAAMFAGGTP.---.GVKHIRAAWADL..................
A0A0F5P8Y7_9SPHN/232-308 ....................SRF.SYRHVQYEPLP.GDIEALLSAWSV..TDAEQATFLR..KIGA.LP..G..ALRELTHILEIASLTASGAG.QPI.SIAHLRDAAK--r.................
A0A377HRW9_9PAST/230-308 ....................SRN.AKRTSIQKTKQ.ADTKAVAEAWGL.rDNQEVLEVMQ..RITE.TG..G..GLRILTHTLRLAGMVAKGSN.RLI.DADLITQARAEL..................
A0A238L768_9RHOB/173-248 ...................r-RM.VRPVVIRSIPK.GDVAAFAAARGV..TDATITDALA..ATAK.RH..G..GLADVKRVLDHAAQRA-GDG.K-V.TAADVKAAL---lyl...............
A0A930SW19_9BACT/233-310 ....................SRI.GKRVKLTRPTK.NDVLRLSAAMGIsaDDNDSLRMLF..EIAS.RA..G..ALRSVVKTVRLATMMAGGAS.P--.ALKHLQAAWKDL..................
A0A977LI99_9CAUD/240-318 ....................SRV.AKRVRLSRAKD.ADVLALVDAWQI..QDKEARQLCL..GIGR.RP..G..ALRGLSQTLRLASMFAASNG.IARpGVEHIRDAWQDL..................
A0A2U2C8F4_9RHOB/318-396 ...............srvha---.SRPVCIKRVRR.ADVAALVEGTAF..ATDAAIKALH..AVAPfHG..G..GLRNVQAAMDQAALFSGNDC.P--.TLEHLSWAIRDL..................
A0A0H3JR81_ECO57/223-300 ....................SRL.ARTKQLRKAKK.ADVLAIARAWGI..SGEAELAVMQ..AIAE.KP..G..ALRVLTHTLNQAWLTASGEG.AAL.TEKHINAAFKE-v.................
A0A378BYH9_KLEPO/226-268 ....................SRI.AKRVAINKTKK.ADVAAIADAWHI..TGEKRAR---..----.--..-..--------------------.---.------------fapadrtear........
A0A7S8C726_9HYPH/250-326 ...................r-RI.GKRLRRLQPLD.DDVGALIAAWGI..ADETVTKLAR..ALGR.KP..G..ALSQISKTLQLAGMYAAGEE.RAV.TAADVKAAWAD-..................
A0A2U2DFH9_9HYPH/262-338 ....................SRV.GKRLQRAKPYI.EDLQAYIAAWGI..EDEGCVKFLT..GVGM.KG..G..AFRQIDKTMRMATMLAMAAG.DAV.ALPHIQAAWK--n.................
A0A6N1XAG7_9RHOO/230-307 ....................SRVgGARVVVDLPTE.GDVDALLSAWGI..RXRAVRETAV..MIGV.QD..G..GLRLLSHTVGIARKFAKVKG.KAI.DADIFKAA----avs...............
A0A0P7KPJ3_9RHOB/255-331 ...................r-RV.GNRLSVMKPYA.EDIETFLNAWGI..EDPELRKVGT..KIAQ.KP..G..ALGSLIQTLKAASMIANGMG.VSL.TPEILRAAY---er................
Q1JYS0_DESA6/244-321 ....................SRL.GKRLRLNKPRK.EDVVAVANSFSV..AGDQEQKALY..EISQ.KP..G..ALRGVVKTLRLATMFAAGDN.EAV.QLEHIRAAWHDL..................
A0A5S9R6U1_9HYPH/238-315 ....................SRV.GVRKVQHAARA.ADICMVLEAWGI..TAPAVLQVLK..QIAR.KP..G..ALRIMNKVIRLAAFGAGCTV.ASL.TVAHIERAWAQL..................
A0A7X5J7I7_9HYPH/259-336 ...................r-RI.GKRLKRNKPYA.EDLTAYIAAWGV..TDPDAVRFLT..GVGM.KG..G..ALGQIDKTMKLASMLSMSEG.AEQvTATHIRDAWS--n.................
A0A285UN08_9HYPH/258-334 ....................SRV.GKHLKRTAAHT.SDLHAYIAAWEI..EDPDCVKFLT..GIGM.KG..G..AMRQIEKTVKLAFMAANGAG.QKL.TLDHLQHAWR--r.................
#=GC SS_cons ....................---.--TT--SS-SG.GGTTHHHHSSSS..SSSHHHHHHH..TTSS.S-..S..-HHHHHHHHGGGT-TT-TTS.--S.SHHHHHHHHTSS..................
#=GC seq_cons ....................SRl.u+Rlthppspt.sDlpAlhsAWul..s-psthchLt..tIup.+s..G..ALRtls+sl+lAshhAtGps.p.l.shpclcsAat....................
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