#=GF ID PRD1_P5_spike_N
#=GF AC PF08948.16
#=GF DE Bacteriophage PRD1, P5, spike N-terminal
#=GF PI DUF1859;
#=GF AU Mistry J;0000-0003-2479-5322
#=GF AU Sammut SJ;0000-0003-4472-904X
#=GF SE pdb_1w8x
#=GF GA 25.00 25.00;
#=GF TC 25.20 215.20;
#=GF NC 24.00 20.00;
#=GF BM hmmbuild HMM.ann SEED.ann
#=GF SM hmmsearch -E 1000 -Z 81514348 --cpu 4 HMM pfamseq
#=GF TP Domain
#=GF CL CL0010
#=GF RN [1]
#=GF RM 15525981
#=GF RT Insights into assembly from structural analysis of bacteriophage
#=GF RT PRD1.
#=GF RA Abrescia NG, Cockburn JJ, Grimes JM, Sutton GC, Diprose JM,
#=GF RA Butcher SJ, Fuller SD, San Martin C, Burnett RM, Stuart DI,
#=GF RA Bamford DH, Bamford JK;
#=GF RL Nature. 2004;432:68-74.
#=GF RN [2]
#=GF RM 10956048
#=GF RT Assembly of bacteriophage PRD1 spike complex: role of the
#=GF RT multidomain protein P5.
#=GF RA Caldentey J, Tuma R, Bamford DH;
#=GF RL Biochemistry. 2000;39:10566-10573.
#=GF DR INTERPRO; IPR015043;
#=GF DR SO; 0000417; polypeptide_domain;
#=GF CC The spike structure of bacteriophage PRD1 is comprised of
#=GF CC proteins P2, P5, and P31. P5 is an elongated multidomain trimer.
#=GF CC This domain is found at the N-terminal of bacteriophage PRD1
#=GF CC spike protein P5 and mediates the interaction with protein P31.
#=GF CC The C-terminal domain appears to contain the residues
#=GF CC responsible for the trimerization of the protein [1,2].
#=GF SQ 6
#=GS Q3T4V3_9VIRU/1-126 AC Q3T4V3.1
#=GS Q3T4V2_9VIRU/1-121 AC Q3T4V2.1
#=GS Q3T514_9VIRU/1-121 AC Q3T514.1
#=GS P5_BPPRD/1-121 AC P22536.2
#=GS Q3T515_9VIRU/1-126 AC Q3T515.1
#=GS VP31_BPPRD/1-126 AC P27384.1
#=GS VP31_BPPRD/1-126 DR PDB; 1W8X N; 5-118;
Q3T4V3_9VIRU/1-126 MNVNNPNQMTVTPVYNGCDSGEGPQSVRGYFDAVAGENVKYDLTYLADTQGFTGVQCIYIDNAENDGAFEIDVEETGQRIKCPAGKQGYFPLLVPGRAKFVARHLGSGKKSVPLFFLNFTIAQGVW
Q3T4V2_9VIRU/1-121 MANQQIGGSTVT--YNGAIPMGGPVAINSVIE-IAGTEVLVDLKLDYATGKISGVQTLYIDLRDFLGDVTVTMPDTGQRITARAGTQGYYPVLSTNLMKFIVSATIDGK--FPMNFINFPIALGVW
Q3T514_9VIRU/1-121 MANQQIGGSTVT--YNGAIPMGGPVAINSVIE-IAGTEVLVDLKLDYATGKISGVQTLYIDLRDFLGDVTVTMPDTGQRITARAGTQGYYPVLSTNLMKFIVSATIDGK--FPMNFINFPIALGVW
P5_BPPRD/1-121 MANQQIGGSTVT--YNGAIPMGGPVAINSVIE-IAGTEVLVDLKLDYATGKISGVQTLYIDLRDFLGDVTVTMPDTGQRITARAGTQGYYPVLSTNLMKFIVSATIDGK--FPMNFINFPIALGVW
Q3T515_9VIRU/1-126 MNVNNPNQMTVTPVYNGCDSGEGPQSVRGYFDAVAGENVKYDLTYLADTQGFTGVQCIYIDNAENDGAFEIDVEETGQRIKCPAGKQGYFPLLVPGRAKFVARHLGSGKKSVPLFFLNFTIAQGVW
VP31_BPPRD/1-126 MNVNNPNQMTVTPVYNGCDSGEGPQSVRGYFDAVAGENVKYDLTYLADTQGFTGVQCIYIDNAENDGAFEIDVEETGQRIKCPAGKQGYFPLLVPGRAKFVARHLGSGKKSVPLFFLNFTIAQGVW
#=GR VP31_BPPRD/1-126 SS XXXX-----------TT--SS--EE--EEESSS-EEE----TTT-----EEEE-TT--S-EEEE--TTS--EEEE-SS-EE------SS--EEE--SSSSEEEEEEEESS----S---XXXXXXXX
#=GC SS_cons XXXX-----------TT--SS--EE--EEESSS-EEE----TTT-----EEEE-TT--S-EEEE--TTS--EEEE-SS-EE------SS--EEE--SSSSEEEEEEEESS----S---XXXXXXXX
#=GC seq_cons Msspp.st.TVT..YNGs.shtGP.ulpuhh-.lAGppVhhDLph.hsTtthoGVQslYID.t-..Gshplsh.-TGQRIps.AGpQGYaPlLssshhKFlspthhsGK..hPh.FlNFsIA.GVW
//
