GenomeNet

Database: Pfam
Entry: DUF6041
LinkDB: DUF6041
Original site: DUF6041 
#=GF ID   DUF6041
#=GF AC   PF19507.4
#=GF DE   Family of unknown function (DUF6041)
#=GF AU   Williams LS;0000-0001-5551-8526
#=GF AU   Finn RD;0000-0001-8626-2148
#=GF AU   Fragoso S;0000-0001-7018-3891
#=GF SE   Manual
#=GF GA   27.00 27.00;
#=GF TC   29.50 29.30;
#=GF NC   23.70 22.00;
#=GF BM   hmmbuild HMM.ann SEED.ann
#=GF SM   hmmsearch --cpu 4 -E 1000 -Z 81514348 HMM pfamseq
#=GF TP   Family
#=GF WK   Domain_of_unknown_function
#=GF RN   [1]
#=GF RM   17381736
#=GF RT   Biosynthesis of antibiotic prodiginines in the marine bacterium
#=GF RT   Hahella chejuensis KCTC 2396.
#=GF RA   Kim D, Lee JS, Park YK, Kim JF, Jeong H, Oh TK, Kim BS, Lee CH;
#=GF RL   J Appl Microbiol. 2007;102:937-944.
#=GF DR   INTERPRO; IPR046104;
#=GF DR   SO; 0100021; polypeptide_conserved_region;
#=GF CC   This entry represents a member of a biosynthetic gene cluster
#=GF CC   (BGC). This BGC (BGC0000260) is described by MIBiG as an example
#=GF CC   of the following biosynthetic class, polyketide. This family
#=GF CC   includes a protein from the prodigiosin biosynthetic gene
#=GF CC   cluster from  Hahella chejuensis KCTC 2396 [1]
#=GF SQ   19
#=GS A0A7G1PD37_9ACTN/6-147   AC A0A7G1PD37.1
#=GS A0A975DLD0_9GAMM/1-140   AC A0A975DLD0.1
#=GS A0A0F4QJB8_9GAMM/1-140   AC A0A0F4QJB8.1
#=GS A0A7M2SEU6_9ACTN/6-146   AC A0A7M2SEU6.1
#=GS A0A4P9VPI6_9GAMM/2-137   AC A0A4P9VPI6.1
#=GS A0A918Y3V4_9ACTN/6-145   AC A0A918Y3V4.1
#=GS A0A179B1G3_9ACTO/37-172  AC A0A179B1G3.1
#=GS A0A8J7WRF1_9ACTN/6-67    AC A0A8J7WRF1.1
#=GS A0A1R4LIN0_9VIBR/1-140   AC A0A1R4LIN0.1
#=GS A0A345HXH8_9ACTN/6-146   AC A0A345HXH8.1
#=GS Q2S9K1_HAHCH/5-136       AC Q2S9K1.1
#=GS A0A2I5TP21_SERS3/1-140   AC A0A2I5TP21.1
#=GS A0A1I1G2B8_9GAMM/1-141   AC A0A1I1G2B8.1
#=GS A0A5B7V2Q5_9ACTN/6-138   AC A0A5B7V2Q5.1
#=GS A0A269PMS2_9GAMM/3-143   AC A0A269PMS2.1
#=GS O54148_STRCO/6-146       AC O54148.1
#=GS F3NN66_9ACTN/6-146       AC F3NN66.1
#=GS A0A839RY88_9PSEU/12-143  AC A0A839RY88.1
#=GS A0A2P8Q8P9_9ACTN/6-146   AC A0A2P8Q8P9.1
A0A7G1PD37_9ACTN/6-147              ...LILQRTVGVLYVIAGIGKFFPEIESVEERLDGAADGNDGvAVLGAFTEWLAEHPTGVTVFVAAAMAVSGVVLV.LD..R.S.LVVAALYGQLLMLVCLVVILVSSVPQILVLDAAFFAAAGYLLVRHRRrTPPPSATAPARAGTDN-q...........................
A0A975DLD0_9GAMM/1-140              ...MVIQRIFAVLYMLAGIGKAFPALENVPEILARAAKANEG.TWYYAPSLWFAEHGMFMSTLVGICLFGSGLALW.LN..P.R.WVKRVIYAQLAMMVVFMTILHRAEPKVLFLDSIFILASLYFLRIQHQ.RLPKLKALLSKKFSEP-k...........................
A0A0F4QJB8_9GAMM/1-140              ...MLVQRIFAVLYMLAGLAKAFPQLENVPDILRQAAIANQG.TWYQGLSNLLAQHGDLANVVVAVALFGSGLVLW.LN..P.R.WTRFVIYAQLAMMAVFITILHRAQPQVIPLDAIFIIAALYILRQQFR.RTDTKRVFTSQDFAKP-k...........................
A0A7M2SEU6_9ACTN/6-146              ...LILQRVVGVLYIIAGVGKFFPEIESVEQRLNDAADANHDiAVIGDFTDWLAKYPTGVTVFVAAAMVVSGLVLI.RN..R.E.LVLAALYGQLVMLVCFVIVLVSSVPQILLLDAAFFAAAVHLIVVHRR.APAGSAHRRAEAG----adte........................
A0A4P9VPI6_9GAMM/2-137              kyf---KYLFGTLYLLAGIAKIFPQIEDVGVVLKNAAIANQG.TFLERISNYLYTHELVITVISGLSLFLAGLTLL.IN..R.Y.LIASSI-GQMLMLICFVTLLHRAYWQVIVMDTVFFIFAVLVLKEQLM.LKKQKN-----------iqlqriyq....................
A0A918Y3V4_9ACTN/6-145              ...LLLQRIVGALYILAGIGKFFPQLESVKKRLDDAAKANHG.TVMSGFTDWLDRHPTGVMWFVALAMVSAGVAML.WN..R.RpLVIAALYGQLLMLVMFVLILVGSVPQILGLDAAFFAAAIFLIYRYHS.SGGRAPAAP--------agpsyea.....................
A0A179B1G3_9ACTO/37-172             lrr---RRVLGAAYLAAGVGKCFPAIESTPGRLAQALQANRG.HAEEGVTRWLGDHAEEANTVVAVAMASAGCVLLeRD..S.R.LADAALAMTLPMLGSFMLILRRALPQVVPIDVAFGGAAVHLLFARRRlRRS--------------aapralas....................
A0A8J7WRF1_9ACTN/6-67               ..a-LLQRVSGALYVINGIAKFLPQPDAVEQRLADLP-----.---------------------------------.--..-.-.-----------------------------------------------.-----------------agaasaarrpsrglllltlaaltgllfy
A0A1R4LIN0_9VIBR/1-140              ...MIIQRIFAVLYMLAGIAKLFPQFENVVAELQIAAVANQG.TWYEGVSAWIGTHAQFFNLLSGAILFISGLVLL.LN..P.P.WTKWVIYGQLLMMVVFVTILHRSQPQVILLDAVFALAALYMLRNQFH.RKTAFRPFPTQDFS---tlq.........................
A0A345HXH8_9ACTN/6-146              ...LILQRIVGVLYVIAGIGKFFPEIESVEERLNGAADGNDGiALVGPFTDWLAGHPTGVTVFVAAAMAVSGVVLI.LD..R.I.LVVAALYGQLLMLVCLVVILVSSVPQILVLDAAFFAAAIYLLVRHRR.TPSPSTTAGAPAGTD--hq..........................
Q2S9K1_HAHCH/5-136                  ..k-ILRYLFGALYVMAGVAKAFPQIEDVGVTLQKAAAANQG.TWLAGLSEWLAGNAQLMAWISGIALLASGLCYL.FN..R.M.LIPAVI-GQCVMLAGFVTILHRAFPQIVFVDLIFLIVALLVLWESVN.QKK--------------slyalph.....................
A0A2I5TP21_SERS3/1-140              ...MIIQRLFGILYMLAGLAKAFPQFENVPAVLRQAAIANQG.TWYAAASIWLGAHGDVINILVGVVLFGSGVILM.LN..P.L.WTTLVIYAQLLMMAVFVVILHQSQPQVMLLDGVFALAALYMLRGQYH.RKPKPRTFPTTSFSL--pt..........................
A0A1I1G2B8_9GAMM/1-141              ...MKIQRFFGILYILAGIAKAFPQLEDVPAILQSAATANTG.TGVENLSLWLAQYGQTVNIVIGLVLAISGILLL.IN..H.R.LVKWVIYGQMAMMCIFVTILFRSQPQVIVLDSVFFLAAIYMLRYHNQvHISQSPFFQSSKFENR-r...........................
A0A5B7V2Q5_9ACTN/6-138              ...LLLQRVLGVLYVLAGLAKFVPGVESVEGRLDAAADANEGlAVLGPLSDRLAAHPTAVAALVGVAMAASGAVLV.ADrdR.R.LVVAALGAQLALIACFVAVLVTSVPEILLFDAAFVAAGGRLLLVHAR.VHT--------------rrtp........................
A0A269PMS2_9GAMM/3-143              ...MKVQYFFGILYVLAGIAKAFPELENVPVILHNAATVNMG.TNVEGLSLLLAQYGQTVNIFIGFLLAISGMFLL.IN..H.R.LVKWVIYGQMIMMCFFVAILFRSQPQVIVLDSVFFIAAIYMLRYHNRfRIVQSPSFQSENFENH-i...........................
O54148_STRCO/6-146                  ...LILQRVVGALYILAGIGKFFPQLESVEGRLDDASEANDG.TVISGPVDWLDRHPTGVMWFVAVAMVAAGLALL.WN..R.RgLVIAALYGQLLMLVLFVVILVSSVPEILVMDAAFFAAAIYLLYRYHA.SPGARTAAPSGPTPE--gr..........................
F3NN66_9ACTN/6-146                  ...LILQRVVGVLYIVAGIGKFFPEIESVEQRLDDAAEANDGvAVLGGFTNWLDGHPTGVTVFVAAAMVVSGLVLL.RN..R.E.LVLAALYGQLLMLVCFVLILVGSVPQILVLDAAFFAAGIYLIVVHRR.AAAGSSSVPLDAGTDT-t...........................
A0A839RY88_9PSEU/12-143             .rk--VRTALGVCYLVAGIGKCVPSWESTEQRLGQALKANRN.TPLEGPTRWLHERHEGTNAFVAASMVGAGAALL.SD..DgR.VVDAALVGTLPMLGSFATLLHRALPPVVPVDAAFGAAAVWVLRQRRL.AAKASRS----------a...........................
A0A2P8Q8P9_9ACTN/6-146              ...LILQRIVGVLYVIAGIGKFFPEIESVEERLDGAADGNDGvAVLGPFTDWLAEHPTGVTVFVAAAMVVSGVVLI.LD..R.Y.LVVAALYGQLLMLVCLVVILVSSVPQILVLDAAFFAAAIHLLVRRRR.TPSPSAAATSRARTDN-q...........................
#=GC seq_cons                       ...hllQRlhGlLYllAGIuKhFPplEsVttcLssAApANpG.shltuhopWLupHspslshhVusuhssSGlsLl.hN..+.p.LVhuslYGQLlMlssFVsILhpShPQlllLDusFhhAAlalLhtppp.phstttsh....h....t...........................
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