KEGG   Afipia carboxidovorans OM5 (Goettingen): OCA5_c01180
Entry
OCA5_c01180       CDS       T01617                                 
Symbol
rph
Name
(GenBank) ribonuclease PH
  KO
K00989  ribonuclease PH [EC:2.7.7.56]
Organism
ocg  Afipia carboxidovorans OM5 (Goettingen)
Brite
KEGG Orthology (KO) [BR:ocg00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:ocg03016]
    OCA5_c01180 (rph)
Enzymes [BR:ocg01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.56  tRNA nucleotidyltransferase
     OCA5_c01180 (rph)
Transfer RNA biogenesis [BR:ocg03016]
 Prokaryotic type
  3'processing and CCA adding factors
   3'processing factors
    OCA5_c01180 (rph)
SSDB
Motif
Pfam: RNase_PH RNase_PH_C
Other DBs
NCBI-ProteinID: AEI04850
UniProt: B6JCH9
Position
131467..132183
AA seq 238 aa
MRPSGRAPNELRPVSLERGVVKYAEGSCMVKFGDTRVLVTATLEERLPPWLKGQGRGWVT
AEYGMLPRATHERVRREASAGKQSGRTVEIQRLIGRSLRTTVDLVALGERQITIDCDVIQ
ADGGTRTASITGAWVALADCLQWMKARNMLKNDNVLRDNVAAISCGIYNGTPVLDLDYAE
DSEAETDANFVMTGDGRLVEVQGTAERTPFSQEEFLQLMALAQNGIGRLVELQKIAMA
NT seq 717 nt   +upstreamnt  +downstreamnt
atgcgtcccagcggccgcgcgcccaacgaactgcgccccgtctcgctcgaacgcggcgtg
gtgaaatacgccgaaggttcctgcatggtgaaattcggcgacacccgcgtgctcgtcacc
gcgacgctggaggagcggctgccgccgtggctcaagggtcagggccgcggctgggtcact
gccgaatacggcatgctgccccgcgccacccatgaacgcgtccgccgcgaggcctccgcc
ggcaagcagagcggccgcaccgtggaaatccagcgcctgatcggccgctcgctgcgcacc
accgtcgatctcgtggccctcggcgaacgccagatcaccatcgactgcgacgtgatccag
gctgatggcggcacccgcacagcgtcgatcaccggcgcatgggttgcgctcgccgactgc
ctgcaatggatgaaggcacgcaacatgctgaaaaacgacaacgtgctgcgcgacaatgtc
gccgccatatcctgcggcatctataacggcacgccggtactcgatctcgattacgccgag
gattcagaagccgagaccgatgcgaacttcgtcatgaccggcgacggccgcctcgtcgag
gtgcagggcaccgccgagcgcacgccgttctcgcaggaggaatttctgcagctgatggca
ctcgcgcaaaacggcatcggccgtctggtcgaattgcaaaagatcgcgatggcgtaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   SWISS-PROT (1)   
Protein domain (2)   
   Pfam (2)   
All databases (12)   

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