KEGG   Candidatus Methylopumilus planktonicus: BN1208_0040
Entry
BN1208_0040       CDS       T03869                                 
Symbol
rph
Name
(GenBank) Ribonuclease PH
  KO
K00989  ribonuclease PH [EC:2.7.7.56]
Organism
mbat  Candidatus Methylopumilus planktonicus
Brite
KEGG Orthology (KO) [BR:mbat00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:mbat03016]
    BN1208_0040 (rph)
Enzymes [BR:mbat01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.56  tRNA nucleotidyltransferase
     BN1208_0040 (rph)
Transfer RNA biogenesis [BR:mbat03016]
 Prokaryotic type
  3'processing and CCA adding factors
   3'processing factors
    BN1208_0040 (rph)
SSDB
Motif
Pfam: RNase_PH RNase_PH_C
Other DBs
NCBI-ProteinID: CEZ18936
UniProt: A0A0D6ETK0
Position
1:complement(39047..39760)
AA seq 237 aa
MRLNQRAHNQLRPVEIIRHYTKHAEGSVLIKFGDTHVLCTASIDEKVPSFLKGQSQGWIT
AEYGMLPRSTGSRMDREAARGKQSGRTQEIQRLIGRSLRAIIDLKKLGERTIQIDCDVIQ
ADGGTRTASITGAYVAVHDAIKHLMDKKLISESPLIDYVAAISVGLHEGNPLLDLDYSED
SSCDTDMNIVMTGSGGFVEIQGTAEGAPFSREMMDQMSDLAAQGIKELIQLQKNVLK
NT seq 714 nt   +upstreamnt  +downstreamnt
atgagattaaatcaacgcgctcacaaccaattaagaccggttgaaattattaggcattac
acaaaacatgctgaaggctccgtcttgattaaattcggggatacgcatgtactttgcact
gcaagtattgatgaaaaagtaccttcttttttaaagggtcaaagtcaaggctggattaca
gctgaatatggcatgctaccaagatcgacagggtcaagaatggacagagaagcagcacgc
ggaaaacaatccggtaggactcaagaaatacaacgtcttattggacggagcttacgcgcg
attattgatttaaaaaaactgggcgaacgaaccattcaaattgattgcgacgtcattcaa
gccgatggtggcacacgcacagccagtattacgggtgcttatgtcgcagtacatgatgcc
attaaacatttaatggataaaaaactgatttcagaatcgccgctcattgattatgtggca
gccatttctgtagggctgcacgaaggaaatccactattagatttggattacagtgaagat
tcaagttgtgacacagatatgaatatcgtcatgacaggctcaggggggtttgtggaaatt
caaggtaccgcagaaggggcacctttttcgcgcgaaatgatggaccaaatgtctgacctt
gcagcgcaaggcattaaagaactcattcaattacaaaaaaacgttttaaagtaa

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Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (2)   
   Pfam (2)   
All databases (11)   

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