REBASE Methylation Sensitivity 11/5/2024

MODIFICATION TYPES: natural modifications: 2: 4: 5: 6: 8: 9: 25: 26: 30: 31: 32: gh m4 m5 m6 hC U fC cC Q dG 7d glucosylated-hydroxymethylcytosine N4-methylcytosine 5-methylcytosine 6-methyladenosine 5-hydroxymethylcytosine uracil 5-formylcytosine 5-carboxylcytosine queuosine deoxyarchaeosine 7-deazaguanine synthetic modifications: 1: 3: 7: 10: 11: 12: 13: 14: 15: 16: 17: 18: 19: 20: 21: 22: 23: 24: 27: 28: 29: m1 m3 hU 7Z 7E 7P 7N 8B 8M p5 EU PU NU EC PC NC zC pG VU VC VA 1-methyadenosine 3-methylcytosine 5-hydroxymethyluracil 7-deazaadenine 7-ethynyladenine 7-phenyladenine 7-nitrophenyladenine 8-bromoadenine 8-methyladenine phosphoglucuronated 5-(4',5'-dihydroxypentyl) uracil 5-ethynyluracil 5-phenyluracil 5-(3-nitro)phenyluracil 5-ethynylcytosine 5-phenylcytosine 5-(3-nitrophenyl)cytosine 6-amino-5-nitro-3-(1'-beta-D-2'-deoxyribofuranosyl)-2(1H)-pyridone 2-amino-8-(1'-beta-D-2'-deoxyribofuranosyl)-imidazo[1,2-a]-1,3,5-triazin-4(8H)-one 5-vinyluracil 5-vinylcytosine 7-deaza-7-vinyladenine

All enzymes having methylation sensitivity data:

AarI AasI AatI AatII AccI AccII AccIII Acc16I Acc65I AccB1I AccB7I AccBSI AciI AclI AcuI AdeI AfaI AfeI AflI AflII AflIII AgeI AgsI AhaII AhdI AjiI AjnI M.AjnI AjuI AleI AlfI AloI AluI M.AluI AluBI AlwI Nt.AlwI Alw21I Alw26I Alw44I AlwNI Ama87I AmaSI AorI Aor51HI AosII ApaI ApaLI ApeI ApeKI ApoI ApyI AquI AscI AseI AsiSI Asp700I Asp718I AspA2I AspCNI AspLEI AspMI AspMDI AspS9I M.AspS9I AsuII AsuC2I AsuHPI AsuNHI AtuSI AvaI AvaII AviII AvrII BaeI BaeGI BalI BamFI BamHI

M.BamHI BamKI BanI BanII BarI BauI BazI BbeI BbiII BbrPI BbsI BbuI BbvI BbvCI Nb.BbvCI Nt.BbvCI Bca77I BccI Bce243I BceAI BcgI BciT130I BciVI BclI BcnI BcoDI BdaI BepI BfaI BfiI Bfi57I Bfi89I BfrI BfrBI BfuI BfuAI BfuCI BglI BglII BinI BisI BloHI BloMGI BlpI BmaDI Bme18I Bme216I Bme1390I Bme1580I BmeTI BmeT110I BmgBI BmgT120I BmrI BmtI BnaI BoxI BpiI BplI BpmI BpuI Bpu10I Bpu1102I BpuEI BsaI Bsa29I BsaAI BsaBI BsaHI BsaJI BsaWI BsaXI BscI Bsc4I BscFI BscXII Bse1I Bse8I Bse634I

BseAI BseCI BseDI Bse3DI BseGI BseJI BseLI BseMI BseMII BseRI BseSI BseXI BseYI BsgI Bsh1236I Bsh1285I Bsh1365I BshFI BshGI BshNI BshTI BsiBI BsiEI BsiHKAI BsiLI BsiMI BsiQI BsiSI BsiWI BsiXI BslI BslFI BsmI Nb.BsmI BsmAI Nt.BsmAI BsmBI BsmFI Bso31I BsoBI BsoFI Bsp19I Bsp49I Bsp51I Bsp52I Bsp54I Bsp56I Bsp57I Bsp58I Bsp59I Bsp60I Bsp61I Bsp64I Bsp65I Bsp66I Bsp67I Bsp68I Bsp72I Bsp91I Bsp105I Bsp106I Bsp119I Bsp120I Bsp122I Bsp143I Bsp143II Bsp1286I Bsp1720I Bsp2095I BspAI BspCNI BspDI Nt.BspD6I BspEI BspFI BspFNI BspHI BspJ64I BspKT6I

BspLI BspLU11III BspMI BspMII BspOI BspPI BspQI Nt.BspQI BspRI BspST5I BspT104I BspT107I BspXI BspXII BspZEI BsrI BsrBI BsrBRI BsrDI Nb.BsrDI BsrFI BsrGI BsrPII BssAI BssECI BssHII BssKI BssSI Nb.BssSI BssT1I BstI Bst6I Bst1107I BstAPI BstAUI BstBI Bst4CI BstC8I BstDEI BstDSI BstEII BstEIII BstENII BstF5I BstGI BstH2I BstHHI BstKTI BstMAI BstMWI BstNI M.BstNI Nt.BstNBI BstNSI BstOI BstPI BstSCI BstSFI BstSLI BstUI Bst2UI BstVI BstV1I BstV2I BstXI BstYI BstZ17I BsuI Bsu15I Bsu36I BsuBI BsuEII BsuFI BsuMI BsuRI BsuTUI BtcI BtgI BtgZI

BtrI BtsI BtsIMutI Nb.BtsI BtsCI BveI CacI Cac8I CaiI CauII CbeI CbiI CboI CbrI CceI CciI CcrI CcyI CfoI CfrI Cfr6I Cfr9I Cfr10I Cfr13I Cfr42I CfrBI CfuI ClaI CpaAI CpeI CpfI CpfAI CpoI CseI CspI Csp5I Csp6I Csp45I CspAI CspCI Csp68KII CthI CthII CtyI CviAI CviAII CviBI M.CviBIII CviJI CviKI-1 CviKI Nt.CviPII CviQI Nt.CviQXI CviRI CviRII CviSIII DdeI DpnI DpnII DraI DraII DraIII DrdI DriI DsaV EaeI EagI Eam1104I Eam1105I EarI EcaI EciI Ecl136II EclXI Ecl18kI Eco24I Eco31I Eco32I

Eco47I Eco47III Eco52I Eco57I Eco72I Eco88I Eco91I Eco105I Eco147I Eco1831I EcoAI EcoBI EcoDI EcoHI EcoHK31I EcoICRI EcoKI M.EcoKDam Eco57MI EcoNI EcoO65I EcoO109I EcoPI EcoP15I EcoRI M.EcoRI EcoRII M.EcoRII EcoRV EcoR124I EcoR124II EcoT22I Eco53kI EheI EsaBC3I EsaBC4I EsaLHCI Esp3I Esp1396I FaeI FalI FaqI FatI FauI FbaI FnuDII FnuEI Fnu4HI FokI M.FokI FriOI FseI FspI FspAI FspBI Fsp4HI GsaI Gst1588II GsuI HaeII HaeIII M.HaeIII HaeIV HapII HgaI HgiAI HgiCI HgiCII HgiDI HgiEI HgiHI HhaI HhaII M.HhaII Hin1I Hin4I Hin6I HinP1I HincII

HindII HindIII HinfI HpaI HpaII M.HpaII HphI M1.HphI Hpy8I Hpy99I Hpy99II Hpy166II Hpy188I Hpy188III HpyAIII HpyAIV HpyAV HpyCH4III HpyCH4IV HpyCH4V HpyF10VI HpySE526I HsoI HspAI ItaI KasI KpnI Kpn2I KroNI KspI Ksp22I KspAI Kzo9I LguI LlaAI LlaKR2I LweI MabI MaeII Mae7806ORF260P MamI MbiI MboI MboII M1.MboII Mel3JI Mel5JI Mel7JI Mel4OI Mel5OI Mel2TI Mel5TI MfeI MflI MhlI MlsI MluI Mlu9273I Mlu9273II MluCI MlyI MmeI MmeII Mmu5I MmuP2I MnlI Mox20I Mph1103I MpsI MroI MroXI MscI MseI MslI MspI M.MspI Msp20I MspA1I MspBI

MspJI MspNI MspNII MspR9I MssI MstII MthTI MthZI MunI MvaI Mva1269I MvnI MwoI NaeI Nan19573II NarI NciI NciAI NcoI NcuI NdeI NdeII NgoBV NgoBVIII NgoCI NgoCII NgoFVII NgoMIV NgoPII NgoSII NgoWI NheI NlaIII NlaIV NlaXP NmeAIII NmeSI NmuCI NmuDI NmuEI NotI NruI NsbI NsiI NspI NspV NspBII NspHI OliI PacI PaeI PaeR7I PagI PaqCI PasI PauI PbrTI PceI PciI PciSI PctI PdiI PdmI Pei9403I PfaI PfeI Pfl23II PflFI PflMI PfoI PhoI PleI Ple19I PluTI PmaCI PmeI PmlI PpiI Ppu21I

PpuMI Pru2I PscI PshAI PsiI Psp5II Psp6I Psp39I Psp1406I PspGI PspN4I PspOMI PspPI PspXI PsrI PstI PstNI PsuI PsyI PvuI PvuII Ral8I RalF40I RflFI RflFII RigI Rrh4273I RsaI RsaNI RshI RspXI RsrI RsrII SacI SacII SalI SalDI SapI SatI Sau96I Sau3239I Sau3AI SauLPI SauMI SbfI Sbo13I ScaI Scg2I SchI ScrFI SdaI SduI SenPIP SexAI SfaNI SfcI SfiI SfoI Sfr303I SfuI SgfI SgrAI SgrBI SgsI SinI SlaI SmaI SmiMI SmlI SmoI SmuI SnaBI SnoI SolI SpeI SphI SplI SpoI SrfI

Sru30DI SscL1I Sse9I Sse8387I SseBI SsiI SsoI SsoII SspI SspMI SspRFI SstI SstII Sth302I Sth368I StsI StuI StyI StyD4I StyLTI StyLTIII StySJI StySPI StySQI SuaI SuiI SwaI TaaI TaiI TaqI M.TaqI TaqII TaqXI TasI TauI TfiI TflI ThaI TliI TrsKTI TrsSI TrsTI Tru1I Tru9I TseI TsoI Tsp45I Tsp509I TspMI TspRI TstI Tth111I TthHB8I Van91I VneI VpaK11BI VspI M.VspI XapI XbaI XceI XcmI XcyI XhoI XhoII XmaI XmaIII XmiI XmnI XorII XspI ZanI ZraI ZrmI Zsp2I