AU1350501A - Methods and devices for identifying patterns in biological systems and methods for uses thereof - Google Patents

Methods and devices for identifying patterns in biological systems and methods for uses thereof

Info

Publication number
AU1350501A
AU1350501A AU13505/01A AU1350501A AU1350501A AU 1350501 A AU1350501 A AU 1350501A AU 13505/01 A AU13505/01 A AU 13505/01A AU 1350501 A AU1350501 A AU 1350501A AU 1350501 A AU1350501 A AU 1350501A
Authority
AU
Australia
Prior art keywords
methods
devices
biological systems
identifying patterns
patterns
Prior art date
Legal status (The legal status is an assumption and is not a legal conclusion. Google has not performed a legal analysis and makes no representation as to the accuracy of the status listed.)
Abandoned
Application number
AU13505/01A
Inventor
Stephen D. Barnhill
Isabelle Guyon
Jason Weston
Current Assignee (The listed assignees may be inaccurate. Google has not performed a legal analysis and makes no representation or warranty as to the accuracy of the list.)
BARNHILL TECHNOLOGIES LLC
Original Assignee
BARNHILL TECHNOLOGIES LLC
Priority date (The priority date is an assumption and is not a legal conclusion. Google has not performed a legal analysis and makes no representation as to the accuracy of the date listed.)
Filing date
Publication date
Priority claimed from US09/568,301 external-priority patent/US6427141B1/en
Priority claimed from US09/578,011 external-priority patent/US6658395B1/en
Priority claimed from US09/633,850 external-priority patent/US6789069B1/en
Application filed by BARNHILL TECHNOLOGIES LLC filed Critical BARNHILL TECHNOLOGIES LLC
Publication of AU1350501A publication Critical patent/AU1350501A/en
Abandoned legal-status Critical Current

Links

Classifications

    • G—PHYSICS
    • G16—INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR SPECIFIC APPLICATION FIELDS
    • G16H—HEALTHCARE INFORMATICS, i.e. INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR THE HANDLING OR PROCESSING OF MEDICAL OR HEALTHCARE DATA
    • G16H50/00—ICT specially adapted for medical diagnosis, medical simulation or medical data mining; ICT specially adapted for detecting, monitoring or modelling epidemics or pandemics
    • G16H50/70—ICT specially adapted for medical diagnosis, medical simulation or medical data mining; ICT specially adapted for detecting, monitoring or modelling epidemics or pandemics for mining of medical data, e.g. analysing previous cases of other patients
    • G—PHYSICS
    • G06—COMPUTING; CALCULATING OR COUNTING
    • G06F—ELECTRIC DIGITAL DATA PROCESSING
    • G06F18/00—Pattern recognition
    • G06F18/20—Analysing
    • G06F18/21—Design or setup of recognition systems or techniques; Extraction of features in feature space; Blind source separation
    • G06F18/211—Selection of the most significant subset of features
    • G06F18/2115—Selection of the most significant subset of features by evaluating different subsets according to an optimisation criterion, e.g. class separability, forward selection or backward elimination
    • G—PHYSICS
    • G06—COMPUTING; CALCULATING OR COUNTING
    • G06F—ELECTRIC DIGITAL DATA PROCESSING
    • G06F18/00—Pattern recognition
    • G06F18/20—Analysing
    • G06F18/21—Design or setup of recognition systems or techniques; Extraction of features in feature space; Blind source separation
    • G06F18/214—Generating training patterns; Bootstrap methods, e.g. bagging or boosting
    • G—PHYSICS
    • G16—INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR SPECIFIC APPLICATION FIELDS
    • G16B—BIOINFORMATICS, i.e. INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR GENETIC OR PROTEIN-RELATED DATA PROCESSING IN COMPUTATIONAL MOLECULAR BIOLOGY
    • G16B25/00—ICT specially adapted for hybridisation; ICT specially adapted for gene or protein expression
    • G16B25/10—Gene or protein expression profiling; Expression-ratio estimation or normalisation
    • G—PHYSICS
    • G16—INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR SPECIFIC APPLICATION FIELDS
    • G16B—BIOINFORMATICS, i.e. INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR GENETIC OR PROTEIN-RELATED DATA PROCESSING IN COMPUTATIONAL MOLECULAR BIOLOGY
    • G16B40/00—ICT specially adapted for biostatistics; ICT specially adapted for bioinformatics-related machine learning or data mining, e.g. knowledge discovery or pattern finding
    • G—PHYSICS
    • G16—INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR SPECIFIC APPLICATION FIELDS
    • G16B—BIOINFORMATICS, i.e. INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR GENETIC OR PROTEIN-RELATED DATA PROCESSING IN COMPUTATIONAL MOLECULAR BIOLOGY
    • G16B40/00—ICT specially adapted for biostatistics; ICT specially adapted for bioinformatics-related machine learning or data mining, e.g. knowledge discovery or pattern finding
    • G16B40/20—Supervised data analysis
    • G—PHYSICS
    • G16—INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR SPECIFIC APPLICATION FIELDS
    • G16B—BIOINFORMATICS, i.e. INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR GENETIC OR PROTEIN-RELATED DATA PROCESSING IN COMPUTATIONAL MOLECULAR BIOLOGY
    • G16B40/00—ICT specially adapted for biostatistics; ICT specially adapted for bioinformatics-related machine learning or data mining, e.g. knowledge discovery or pattern finding
    • G16B40/30—Unsupervised data analysis
    • G—PHYSICS
    • G16—INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR SPECIFIC APPLICATION FIELDS
    • G16H—HEALTHCARE INFORMATICS, i.e. INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR THE HANDLING OR PROCESSING OF MEDICAL OR HEALTHCARE DATA
    • G16H10/00—ICT specially adapted for the handling or processing of patient-related medical or healthcare data
    • G16H10/40—ICT specially adapted for the handling or processing of patient-related medical or healthcare data for data related to laboratory analysis, e.g. patient specimen analysis
    • G—PHYSICS
    • G16—INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR SPECIFIC APPLICATION FIELDS
    • G16B—BIOINFORMATICS, i.e. INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR GENETIC OR PROTEIN-RELATED DATA PROCESSING IN COMPUTATIONAL MOLECULAR BIOLOGY
    • G16B25/00—ICT specially adapted for hybridisation; ICT specially adapted for gene or protein expression
    • G—PHYSICS
    • G16—INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR SPECIFIC APPLICATION FIELDS
    • G16H—HEALTHCARE INFORMATICS, i.e. INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR THE HANDLING OR PROCESSING OF MEDICAL OR HEALTHCARE DATA
    • G16H50/00—ICT specially adapted for medical diagnosis, medical simulation or medical data mining; ICT specially adapted for detecting, monitoring or modelling epidemics or pandemics
    • G16H50/20—ICT specially adapted for medical diagnosis, medical simulation or medical data mining; ICT specially adapted for detecting, monitoring or modelling epidemics or pandemics for computer-aided diagnosis, e.g. based on medical expert systems
    • Y—GENERAL TAGGING OF NEW TECHNOLOGICAL DEVELOPMENTS; GENERAL TAGGING OF CROSS-SECTIONAL TECHNOLOGIES SPANNING OVER SEVERAL SECTIONS OF THE IPC; TECHNICAL SUBJECTS COVERED BY FORMER USPC CROSS-REFERENCE ART COLLECTIONS [XRACs] AND DIGESTS
    • Y02—TECHNOLOGIES OR APPLICATIONS FOR MITIGATION OR ADAPTATION AGAINST CLIMATE CHANGE
    • Y02A—TECHNOLOGIES FOR ADAPTATION TO CLIMATE CHANGE
    • Y02A90/00—Technologies having an indirect contribution to adaptation to climate change
    • Y02A90/10—Information and communication technologies [ICT] supporting adaptation to climate change, e.g. for weather forecasting or climate simulation

Landscapes

  • Engineering & Computer Science (AREA)
  • Health & Medical Sciences (AREA)
  • Data Mining & Analysis (AREA)
  • Medical Informatics (AREA)
  • Physics & Mathematics (AREA)
  • Life Sciences & Earth Sciences (AREA)
  • Theoretical Computer Science (AREA)
  • Public Health (AREA)
  • General Health & Medical Sciences (AREA)
  • Evolutionary Biology (AREA)
  • Bioinformatics & Cheminformatics (AREA)
  • Bioinformatics & Computational Biology (AREA)
  • Epidemiology (AREA)
  • Evolutionary Computation (AREA)
  • Artificial Intelligence (AREA)
  • Computer Vision & Pattern Recognition (AREA)
  • Databases & Information Systems (AREA)
  • Spectroscopy & Molecular Physics (AREA)
  • Biotechnology (AREA)
  • Biophysics (AREA)
  • Bioethics (AREA)
  • Software Systems (AREA)
  • Primary Health Care (AREA)
  • Genetics & Genomics (AREA)
  • General Physics & Mathematics (AREA)
  • General Engineering & Computer Science (AREA)
  • Biomedical Technology (AREA)
  • Pathology (AREA)
  • Molecular Biology (AREA)
  • Investigating Or Analysing Biological Materials (AREA)
  • Measuring Or Testing Involving Enzymes Or Micro-Organisms (AREA)
AU13505/01A 1999-10-27 2000-10-27 Methods and devices for identifying patterns in biological systems and methods for uses thereof Abandoned AU1350501A (en)

Applications Claiming Priority (17)

Application Number Priority Date Filing Date Title
US16180699P 1999-10-27 1999-10-27
US60161806 1999-10-27
US16870399P 1999-12-02 1999-12-02
US60168703 1999-12-02
US18459600P 2000-02-24 2000-02-24
US60184596 2000-02-24
US19121900P 2000-03-22 2000-03-22
US60191219 2000-03-22
US09/568,301 US6427141B1 (en) 1998-05-01 2000-05-09 Enhancing knowledge discovery using multiple support vector machines
US09568301 2000-05-09
US09/578,011 US6658395B1 (en) 1998-05-01 2000-05-24 Enhancing knowledge discovery from multiple data sets using multiple support vector machines
US09578011 2000-05-24
US20702600P 2000-05-25 2000-05-25
US60207026 2000-05-25
US09/633,850 US6789069B1 (en) 1998-05-01 2000-08-07 Method for enhancing knowledge discovered from biological data using a learning machine
US09633850 2000-08-07
PCT/US2000/029712 WO2001031579A2 (en) 1999-10-27 2000-10-27 Methods and devices for identifying patterns in biological patterns

Publications (1)

Publication Number Publication Date
AU1350501A true AU1350501A (en) 2001-05-08

Family

ID=27575021

Family Applications (1)

Application Number Title Priority Date Filing Date
AU13505/01A Abandoned AU1350501A (en) 1999-10-27 2000-10-27 Methods and devices for identifying patterns in biological systems and methods for uses thereof

Country Status (2)

Country Link
AU (1) AU1350501A (en)
WO (1) WO2001031579A2 (en)

Families Citing this family (21)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
ATE406627T1 (en) 2000-06-19 2008-09-15 Correlogic Systems Inc HEURISTIC CLASSIFICATION METHOD
AU2001280581A1 (en) 2000-07-18 2002-01-30 Correlogic Systems, Inc. A process for discriminating between biological states based on hidden patterns from biological data
CN1262337C (en) 2000-11-16 2006-07-05 赛弗根生物系统股份有限公司 Method for analyzing mass spectra
WO2003015001A2 (en) * 2001-08-03 2003-02-20 Synt:Em S.A. Method for identification of protein function
EP1449108A4 (en) * 2001-11-07 2006-11-22 Health Discovery Corp Pre-processed feature ranking for a support vector machine
JP3896868B2 (en) 2002-02-27 2007-03-22 日本電気株式会社 Pattern feature selection method, classification method, determination method, program, and apparatus
US7395160B2 (en) 2002-07-29 2008-07-01 Correlogic Systems, Inc. Quality assurance/quality control for electrospray ionization processes
WO2004061410A2 (en) 2002-12-18 2004-07-22 Ciphergen Biosystems, Inc. Serum biomarkers in lung cancer
US7072772B2 (en) 2003-06-12 2006-07-04 Predicant Bioscience, Inc. Method and apparatus for modeling mass spectrometer lineshapes
WO2005060608A2 (en) 2003-12-11 2005-07-07 Correlogic Systems, Inc. Method of diagnosing biological states through the use of a centralized, adaptive model, and remote sample processing
CN101855553B (en) 2007-06-29 2014-06-11 韩国安国药品株式会社 Predictive markers for ovarian cancer
CN101981446B (en) * 2008-02-08 2016-03-09 医疗探索公司 For the method and system using support vector machine to analyze flow cytometry data
WO2010077722A1 (en) 2008-12-30 2010-07-08 Centocor Ortho Biotech Inc. Serum markers predicting clinical response to anti-tnf antibodies in patients with ankylosing spondylitis
US8972899B2 (en) 2009-02-10 2015-03-03 Ayasdi, Inc. Systems and methods for visualization of data analysis
US8738303B2 (en) 2011-05-02 2014-05-27 Azure Vault Ltd. Identifying outliers among chemical assays
US8660968B2 (en) 2011-05-25 2014-02-25 Azure Vault Ltd. Remote chemical assay classification
US10288626B2 (en) 2012-09-14 2019-05-14 University Of Kentucky Research Foundation Secreted tumor-associated cytochrome as a blood-based biomarker for cancer
US10776760B2 (en) 2017-11-17 2020-09-15 The Boeing Company Machine learning based repair forecasting
CN109460420A (en) * 2018-09-28 2019-03-12 北京赛博贝斯数据科技有限责任公司 The Knowledge Discovery Method and system of structural data
CN111612231B (en) * 2020-05-13 2023-09-01 云南电网有限责任公司电力科学研究院 Distribution network line re-jump model fusion processing method and device
US11958632B2 (en) * 2020-07-22 2024-04-16 The Boeing Company Predictive maintenance model design system

Family Cites Families (3)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
WO1999022019A1 (en) * 1997-10-29 1999-05-06 Rutgers, The State University Of New Jersey Linking gene sequence to gene function by three-dimensional (3d) protein structure determination
US7321828B2 (en) * 1998-04-13 2008-01-22 Isis Pharmaceuticals, Inc. System of components for preparing oligonucleotides
WO1999057622A2 (en) * 1998-05-01 1999-11-11 Barnhill Technologies, Llc Pre-processing and post-processing for enhancing knowledge discovery using support vector machines

Also Published As

Publication number Publication date
WO2001031579A2 (en) 2001-05-03
WO2001031579A3 (en) 2002-07-11

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Legal Events

Date Code Title Description
MK6 Application lapsed section 142(2)(f)/reg. 8.3(3) - pct applic. not entering national phase