data_6ZNG # _model_server_result.job_id Fg_MfYWfaSGOjpMlTdTQtw _model_server_result.datetime_utc '2024-12-10 06:05:50' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6zng # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"H","auth_seq_id":801}' # _entry.id 6ZNG # _exptl.entry_id 6ZNG _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 809.571 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'ACETYL COENZYME *A' _entity.pdbx_number_of_molecules 6 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 100.61 _cell.angle_gamma 90 _cell.entry_id 6ZNG _cell.length_a 250.422 _cell.length_b 144.792 _cell.length_c 171.138 _cell.Z_PDB 24 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6ZNG _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 1 2 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details hexameric _pdbx_struct_assembly.oligomeric_count 6 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 G N N ? 2 H N N ? 2 I N N ? 2 J N N ? 2 K N N ? 2 L N N # _chem_comp.formula 'C23 H38 N7 O17 P3 S' _chem_comp.formula_weight 809.571 _chem_comp.id ACO _chem_comp.mon_nstd_flag . _chem_comp.name 'ACETYL COENZYME *A' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag N1A C2A ACO sing 1 n y N1A C6A ACO doub 2 n y C2A N3A ACO doub 3 n y C2A H2A ACO sing 4 n n N3A C4A ACO sing 5 n y C4A C5A ACO doub 6 n y C4A N9A ACO sing 7 n y C5A C6A ACO sing 8 n y C5A N7A ACO sing 9 n y C6A N6A ACO sing 10 n n N6A H61A ACO sing 11 n n N6A H62A ACO sing 12 n n N7A C8A ACO doub 13 n y C8A N9A ACO sing 14 n y C8A H8A ACO sing 15 n n N9A C1B ACO sing 16 n n C1B C2B ACO sing 17 n n C1B O4B ACO sing 18 n n C1B H1B ACO sing 19 n n C2B O2B ACO sing 20 n n C2B C3B ACO sing 21 n n C2B H2B ACO sing 22 n n O2B HO2A ACO sing 23 n n C3B O3B ACO sing 24 n n C3B C4B ACO sing 25 n n C3B H3B ACO sing 26 n n O3B P3B ACO sing 27 n n P3B O7A ACO doub 28 n n P3B O8A ACO sing 29 n n P3B O9A ACO sing 30 n n O8A HOA8 ACO sing 31 n n O9A HOA9 ACO sing 32 n n C4B O4B ACO sing 33 n n C4B C5B ACO sing 34 n n C4B H4B ACO sing 35 n n C5B O5B ACO sing 36 n n C5B H51A ACO sing 37 n n C5B H52A ACO sing 38 n n O5B P1A ACO sing 39 n n P1A O1A ACO doub 40 n n P1A O2A ACO sing 41 n n P1A O3A ACO sing 42 n n O2A HOA2 ACO sing 43 n n O3A P2A ACO sing 44 n n P2A O4A ACO doub 45 n n P2A O5A ACO sing 46 n n P2A O6A ACO sing 47 n n O5A HOA5 ACO sing 48 n n O6A CCP ACO sing 49 n n CBP CCP ACO sing 50 n n CBP CDP ACO sing 51 n n CBP CEP ACO sing 52 n n CBP CAP ACO sing 53 n n CCP H121 ACO sing 54 n n CCP H122 ACO sing 55 n n CDP H131 ACO sing 56 n n CDP H132 ACO sing 57 n n CDP H133 ACO sing 58 n n CEP H141 ACO sing 59 n n CEP H142 ACO sing 60 n n CEP H143 ACO sing 61 n n CAP OAP ACO sing 62 n n CAP C9P ACO sing 63 n n CAP H10 ACO sing 64 n n OAP HO1 ACO sing 65 n n C9P O9P ACO doub 66 n n C9P N8P ACO sing 67 n n N8P C7P ACO sing 68 n n N8P HN8 ACO sing 69 n n C7P C6P ACO sing 70 n n C7P H71 ACO sing 71 n n C7P H72 ACO sing 72 n n C6P C5P ACO sing 73 n n C6P H61 ACO sing 74 n n C6P H62 ACO sing 75 n n C5P O5P ACO doub 76 n n C5P N4P ACO sing 77 n n N4P C3P ACO sing 78 n n N4P HN4 ACO sing 79 n n C3P C2P ACO sing 80 n n C3P H31 ACO sing 81 n n C3P H32 ACO sing 82 n n C2P S1P ACO sing 83 n n C2P H21 ACO sing 84 n n C2P H22 ACO sing 85 n n S1P C ACO sing 86 n n C O ACO doub 87 n n C CH3 ACO sing 88 n n CH3 HH31 ACO sing 89 n n CH3 HH32 ACO sing 90 n n CH3 HH33 ACO sing 91 n n # _atom_sites.entry_id 6ZNG _atom_sites.fract_transf_matrix[1][1] 0.003993 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.000748 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.006906 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.005945 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code G 2 ACO A 1 801 2 ACO ACO . H 2 ACO B 1 801 1 ACO ACO . I 2 ACO C 1 801 4 ACO ACO . J 2 ACO D 1 801 3 ACO ACO . K 2 ACO E 1 801 6 ACO ACO . L 2 ACO F 1 801 5 ACO ACO . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N1A ACO . . . H 2 -0.952 -14.027 231.381 1 82.83 ? N1A ACO 801 B 1 HETATM 2 C C2A ACO . . . H 2 -0.579 -14.773 232.445 1 81.89 ? C2A ACO 801 B 1 HETATM 3 N N3A ACO . . . H 2 -0.431 -14.193 233.681 1 75.56 ? N3A ACO 801 B 1 HETATM 4 C C4A ACO . . . H 2 -0.667 -12.86 233.809 1 76.83 ? C4A ACO 801 B 1 HETATM 5 C C5A ACO . . . H 2 -1.04 -12.103 232.773 1 78.3 ? C5A ACO 801 B 1 HETATM 6 C C6A ACO . . . H 2 -1.194 -12.692 231.515 1 81.32 ? C6A ACO 801 B 1 HETATM 7 N N6A ACO . . . H 2 -1.591 -12.205 230.124 1 81.59 ? N6A ACO 801 B 1 HETATM 8 N N7A ACO . . . H 2 -1.202 -10.826 233.185 1 78.48 ? N7A ACO 801 B 1 HETATM 9 C C8A ACO . . . H 2 -0.921 -10.831 234.506 1 83.81 ? C8A ACO 801 B 1 HETATM 10 N N9A ACO . . . H 2 -0.582 -12.072 234.891 1 83.64 ? N9A ACO 801 B 1 HETATM 11 C C1B ACO . . . H 2 -0.218 -12.532 236.17 1 87.81 ? C1B ACO 801 B 1 HETATM 12 C C2B ACO . . . H 2 0.92 -11.988 236.629 1 92.14 ? C2B ACO 801 B 1 HETATM 13 O O2B ACO . . . H 2 2.058 -12.921 236.545 1 92.94 ? O2B ACO 801 B 1 HETATM 14 C C3B ACO . . . H 2 0.627 -11.654 238.114 1 95.77 ? C3B ACO 801 B 1 HETATM 15 O O3B ACO . . . H 2 0.738 -12.754 238.897 1 98.36 ? O3B ACO 801 B 1 HETATM 16 P P3B ACO . . . H 2 2.214 -13.076 239.637 1 101.59 ? P3B ACO 801 B 1 HETATM 17 O O7A ACO . . . H 2 3.227 -13.456 238.596 1 114.13 ? O7A ACO 801 B 1 HETATM 18 O O8A ACO . . . H 2 2.639 -11.862 240.349 1 105.81 ? O8A ACO 801 B 1 HETATM 19 O O9A ACO . . . H 2 2.027 -14.179 240.601 1 98.79 ? O9A ACO 801 B 1 HETATM 20 C C4B ACO . . . H 2 -0.879 -11.254 238.074 1 79.45 ? C4B ACO 801 B 1 HETATM 21 O O4B ACO . . . H 2 -1.405 -12.064 237.199 1 79.36 ? O4B ACO 801 B 1 HETATM 22 C C5B ACO . . . H 2 -1.052 -9.809 237.62 1 76.86 ? C5B ACO 801 B 1 HETATM 23 O O5B ACO . . . H 2 -0.53 -9.011 238.667 1 76.93 ? O5B ACO 801 B 1 HETATM 24 P P1A ACO . . . H 2 0.777 -7.918 238.304 1 162.26 ? P1A ACO 801 B 1 HETATM 25 O O1A ACO . . . H 2 2.121 -8.581 238.574 1 163.77 ? O1A ACO 801 B 1 HETATM 26 O O2A ACO . . . H 2 0.629 -6.616 239.16 1 160.73 ? O2A ACO 801 B 1 HETATM 27 O O3A ACO . . . H 2 0.603 -7.612 236.753 1 95.44 ? O3A ACO 801 B 1 HETATM 28 P P2A ACO . . . H 2 0.414 -6.074 236.162 1 135.19 ? P2A ACO 801 B 1 HETATM 29 O O4A ACO . . . H 2 1.49 -5.17 236.68 1 137.19 ? O4A ACO 801 B 1 HETATM 30 O O5A ACO . . . H 2 0.468 -6.119 234.659 1 134.41 ? O5A ACO 801 B 1 HETATM 31 O O6A ACO . . . H 2 -1.121 -5.547 236.678 1 97.71 ? O6A ACO 801 B 1 HETATM 32 C CBP ACO . . . H 2 -2.825 -5.991 235.011 1 81.75 ? CBP ACO 801 B 1 HETATM 33 C CCP ACO . . . H 2 -1.946 -4.969 235.719 1 98.51 ? CCP ACO 801 B 1 HETATM 34 C CDP ACO . . . H 2 -4.266 -5.842 235.448 1 70.3 ? CDP ACO 801 B 1 HETATM 35 C CEP ACO . . . H 2 -2.429 -7.484 235.294 1 83.01 ? CEP ACO 801 B 1 HETATM 36 C CAP ACO . . . H 2 -2.724 -5.757 233.485 1 94.51 ? CAP ACO 801 B 1 HETATM 37 O OAP ACO . . . H 2 -3.221 -6.968 232.924 1 99.09 ? OAP ACO 801 B 1 HETATM 38 C C9P ACO . . . H 2 -3.576 -4.608 233.015 1 89.77 ? C9P ACO 801 B 1 HETATM 39 O O9P ACO . . . H 2 -3.591 -3.513 233.528 1 90.64 ? O9P ACO 801 B 1 HETATM 40 N N8P ACO . . . H 2 -4.441 -4.804 231.85 1 87 ? N8P ACO 801 B 1 HETATM 41 C C7P ACO . . . H 2 -5.225 -3.675 231.448 1 86.34 ? C7P ACO 801 B 1 HETATM 42 C C6P ACO . . . H 2 -6.621 -3.745 232.25 1 85.69 ? C6P ACO 801 B 1 HETATM 43 C C5P ACO . . . H 2 -7.495 -2.567 231.665 1 76.92 ? C5P ACO 801 B 1 HETATM 44 O O5P ACO . . . H 2 -7.116 -1.457 231.789 1 79.01 ? O5P ACO 801 B 1 HETATM 45 N N4P ACO . . . H 2 -8.74 -2.892 230.979 1 76.74 ? N4P ACO 801 B 1 HETATM 46 C C3P ACO . . . H 2 -9.61 -1.815 230.385 1 82.79 ? C3P ACO 801 B 1 HETATM 47 C C2P ACO . . . H 2 -10.879 -1.615 231.234 1 88.45 ? C2P ACO 801 B 1 HETATM 48 S S1P ACO . . . H 2 -11.811 -3.141 231.359 1 98.82 ? S1P ACO 801 B 1 HETATM 49 C C ACO . . . H 2 -13.612 -2.799 231.252 1 110.54 ? C ACO 801 B 1 HETATM 50 O O ACO . . . H 2 -14.017 -1.706 230.962 1 112.05 ? O ACO 801 B 1 HETATM 51 C CH3 ACO . . . H 2 -14.595 -3.948 231.549 1 109.97 ? CH3 ACO 801 B 1 # _model_server_stats.io_time_ms 21 _model_server_stats.parse_time_ms 11 _model_server_stats.create_model_time_ms 27 _model_server_stats.query_time_ms 264 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 51 #