data_2WBS
#
_model_server_result.job_id            iCRB6lOFzU_E94spd5AxWw 
_model_server_result.datetime_utc      '2024-12-01 04:01:35' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          2wbs 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"D","auth_seq_id":1484}' 
#
_entry.id    2WBS 
#
_exptl.entry_id    2WBS 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              65.409 
_entity.id                          4 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'ZINC ION' 
_entity.pdbx_number_of_molecules    3 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            2WBS 
_cell.length_a            41 
_cell.length_b            45.97 
_cell.length_c            73.91 
_cell.Z_PDB               4 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 2WBS 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        19 
_symmetry.space_group_name_Hall    . 
_symmetry.space_group_name_H-M     'P 21 21 21' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    trimeric 
_pdbx_struct_assembly.oligomeric_count      3 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 4 D N N 
? 4 E N N 
? 4 F N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
metalc ? metalc1 A SG CYS 8 A CYS 402 1_555 F ZN ZN . A ZN 1486 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.204 ? 
metalc ? metalc2 A SG CYS 13 A CYS 407 1_555 F ZN ZN . A ZN 1486 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.286 ? 
metalc ? metalc3 A NE2 HIS 26 A HIS 420 1_555 F ZN ZN . A ZN 1486 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.001 ? 
metalc ? metalc4 A NE2 HIS 30 A HIS 424 1_555 F ZN ZN . A ZN 1486 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.932 ? 
metalc ? metalc5 A SG CYS 38 A CYS 432 1_555 D ZN ZN . A ZN 1484 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.205 ? 
metalc ? metalc6 A SG CYS 43 A CYS 437 1_555 D ZN ZN . A ZN 1484 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.314 ? 
metalc ? metalc7 A NE2 HIS 56 A HIS 450 1_555 D ZN ZN . A ZN 1484 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.12 ? 
metalc ? metalc8 A NE2 HIS 60 A HIS 454 1_555 D ZN ZN . A ZN 1484 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.966 ? 
metalc ? metalc9 A SG CYS 68 A CYS 462 1_555 E ZN ZN . A ZN 1485 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.244 ? 
metalc ? metalc10 A SG CYS 71 A CYS 465 1_555 E ZN ZN . A ZN 1485 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.331 ? 
metalc ? metalc11 A NE2 HIS 84 A HIS 478 1_555 E ZN ZN . A ZN 1485 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.032 ? 
metalc ? metalc12 A NE2 HIS 88 A HIS 482 1_555 E ZN ZN . A ZN 1485 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.103 ? 
hydrog WATSON-CRICK hydrog1 B N1 DG 1 F DG 1 1_555 C N3 DC 7 G DC 7 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? 
hydrog WATSON-CRICK hydrog2 B N2 DG 1 F DG 1 1_555 C O2 DC 7 G DC 7 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? 
hydrog WATSON-CRICK hydrog3 B O6 DG 1 F DG 1 1_555 C N4 DC 7 G DC 7 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? 
hydrog WATSON-CRICK hydrog4 B N1 DA 2 F DA 2 1_555 C N3 DT 6 G DT 6 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? 
hydrog WATSON-CRICK hydrog5 B N6 DA 2 F DA 2 1_555 C O4 DT 6 G DT 6 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? 
hydrog WATSON-CRICK hydrog6 B N1 DG 3 F DG 3 1_555 C N3 DC 5 G DC 5 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? 
hydrog WATSON-CRICK hydrog7 B N2 DG 3 F DG 3 1_555 C O2 DC 5 G DC 5 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? 
hydrog WATSON-CRICK hydrog8 B O6 DG 3 F DG 3 1_555 C N4 DC 5 G DC 5 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? 
hydrog WATSON-CRICK hydrog9 B N1 DG 4 F DG 4 1_555 C N3 DC 4 G DC 4 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? 
hydrog WATSON-CRICK hydrog10 B N2 DG 4 F DG 4 1_555 C O2 DC 4 G DC 4 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? 
hydrog WATSON-CRICK hydrog11 B O6 DG 4 F DG 4 1_555 C N4 DC 4 G DC 4 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? 
hydrog WATSON-CRICK hydrog12 B N3 DC 5 F DC 5 1_555 C N1 DG 3 G DG 3 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? 
hydrog WATSON-CRICK hydrog13 B N4 DC 5 F DC 5 1_555 C O6 DG 3 G DG 3 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? 
hydrog WATSON-CRICK hydrog14 B O2 DC 5 F DC 5 1_555 C N2 DG 3 G DG 3 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? 
hydrog WATSON-CRICK hydrog15 B N1 DG 6 F DG 6 1_555 C N3 DC 2 G DC 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? 
hydrog WATSON-CRICK hydrog16 B N2 DG 6 F DG 6 1_555 C O2 DC 2 G DC 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? 
hydrog WATSON-CRICK hydrog17 B O6 DG 6 F DG 6 1_555 C N4 DC 2 G DC 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? 
hydrog WATSON-CRICK hydrog18 B N3 DC 7 F DC 7 1_555 C N1 DG 1 G DG 1 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? 
hydrog WATSON-CRICK hydrog19 B N4 DC 7 F DC 7 1_555 C O6 DG 1 G DG 1 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? 
hydrog WATSON-CRICK hydrog20 B O2 DC 7 F DC 7 1_555 C N2 DG 1 G DG 1 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? 
#
_chem_comp.formula           'Zn 2' 
_chem_comp.formula_weight    65.409 
_chem_comp.id                ZN 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'ZINC ION' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
_atom_sites.entry_id                     2WBS 
_atom_sites.fract_transf_matrix[1][1]    0.02439 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.021753 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.01353 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
D 4 ZN A 1 1484 1484 ZN ZN . 
E 4 ZN A 1 1485 1485 ZN ZN . 
F 4 ZN A 1 1486 1486 ZN ZN . 
G 5 GOL A 1 1487 1487 GOL GOL . 
H 6 HOH A 1 2001 2001 HOH HOH . 
H 6 HOH A 2 2002 2002 HOH HOH . 
H 6 HOH A 3 2003 2003 HOH HOH . 
H 6 HOH A 4 2004 2004 HOH HOH . 
H 6 HOH A 5 2005 2005 HOH HOH . 
H 6 HOH A 6 2006 2006 HOH HOH . 
H 6 HOH A 7 2007 2007 HOH HOH . 
H 6 HOH A 8 2008 2008 HOH HOH . 
H 6 HOH A 9 2009 2009 HOH HOH . 
H 6 HOH A 10 2010 2010 HOH HOH . 
H 6 HOH A 11 2011 2011 HOH HOH . 
H 6 HOH A 12 2012 2012 HOH HOH . 
H 6 HOH A 13 2013 2013 HOH HOH . 
H 6 HOH A 14 2014 2014 HOH HOH . 
H 6 HOH A 15 2015 2015 HOH HOH . 
H 6 HOH A 16 2016 2016 HOH HOH . 
H 6 HOH A 17 2017 2017 HOH HOH . 
H 6 HOH A 18 2018 2018 HOH HOH . 
H 6 HOH A 19 2019 2019 HOH HOH . 
H 6 HOH A 20 2020 2020 HOH HOH . 
H 6 HOH A 21 2021 2021 HOH HOH . 
H 6 HOH A 22 2022 2022 HOH HOH . 
H 6 HOH A 23 2023 2023 HOH HOH . 
H 6 HOH A 24 2024 2024 HOH HOH . 
H 6 HOH A 25 2025 2025 HOH HOH . 
H 6 HOH A 26 2026 2026 HOH HOH . 
H 6 HOH A 27 2027 2027 HOH HOH . 
H 6 HOH A 28 2028 2028 HOH HOH . 
H 6 HOH A 29 2029 2029 HOH HOH . 
H 6 HOH A 30 2030 2030 HOH HOH . 
H 6 HOH A 31 2031 2031 HOH HOH . 
H 6 HOH A 32 2032 2032 HOH HOH . 
H 6 HOH A 33 2033 2033 HOH HOH . 
H 6 HOH A 34 2034 2034 HOH HOH . 
H 6 HOH A 35 2035 2035 HOH HOH . 
H 6 HOH A 36 2036 2036 HOH HOH . 
H 6 HOH A 37 2037 2037 HOH HOH . 
H 6 HOH A 38 2038 2038 HOH HOH . 
H 6 HOH A 39 2039 2039 HOH HOH . 
H 6 HOH A 40 2040 2040 HOH HOH . 
H 6 HOH A 41 2041 2041 HOH HOH . 
H 6 HOH A 42 2042 2042 HOH HOH . 
H 6 HOH A 43 2043 2043 HOH HOH . 
H 6 HOH A 44 2044 2044 HOH HOH . 
H 6 HOH A 45 2045 2045 HOH HOH . 
H 6 HOH A 46 2046 2046 HOH HOH . 
H 6 HOH A 47 2047 2047 HOH HOH . 
H 6 HOH A 48 2048 2048 HOH HOH . 
H 6 HOH A 49 2049 2049 HOH HOH . 
H 6 HOH A 50 2050 2050 HOH HOH . 
H 6 HOH A 51 2051 2051 HOH HOH . 
H 6 HOH A 52 2052 2052 HOH HOH . 
H 6 HOH A 53 2053 2053 HOH HOH . 
H 6 HOH A 54 2054 2054 HOH HOH . 
H 6 HOH A 55 2055 2055 HOH HOH . 
H 6 HOH A 56 2056 2056 HOH HOH . 
H 6 HOH A 57 2057 2057 HOH HOH . 
H 6 HOH A 58 2058 2058 HOH HOH . 
H 6 HOH A 59 2059 2059 HOH HOH . 
H 6 HOH A 60 2060 2060 HOH HOH . 
H 6 HOH A 61 2061 2061 HOH HOH . 
H 6 HOH A 62 2062 2062 HOH HOH . 
H 6 HOH A 63 2063 2063 HOH HOH . 
H 6 HOH A 64 2064 2064 HOH HOH . 
H 6 HOH A 65 2065 2065 HOH HOH . 
H 6 HOH A 66 2066 2066 HOH HOH . 
H 6 HOH A 67 2067 2067 HOH HOH . 
H 6 HOH A 68 2068 2068 HOH HOH . 
H 6 HOH A 69 2069 2069 HOH HOH . 
H 6 HOH A 70 2070 2070 HOH HOH . 
H 6 HOH A 71 2071 2071 HOH HOH . 
H 6 HOH A 72 2072 2072 HOH HOH . 
H 6 HOH A 73 2073 2073 HOH HOH . 
H 6 HOH A 74 2074 2074 HOH HOH . 
H 6 HOH A 75 2075 2075 HOH HOH . 
H 6 HOH A 76 2076 2076 HOH HOH . 
H 6 HOH A 77 2077 2077 HOH HOH . 
H 6 HOH A 78 2078 2078 HOH HOH . 
H 6 HOH A 79 2079 2079 HOH HOH . 
I 6 HOH F 1 2001 2001 HOH HOH . 
I 6 HOH F 2 2002 2002 HOH HOH . 
I 6 HOH F 3 2003 2003 HOH HOH . 
I 6 HOH F 4 2004 2004 HOH HOH . 
I 6 HOH F 5 2005 2005 HOH HOH . 
I 6 HOH F 6 2006 2006 HOH HOH . 
I 6 HOH F 7 2007 2007 HOH HOH . 
I 6 HOH F 8 2008 2008 HOH HOH . 
I 6 HOH F 9 2009 2009 HOH HOH . 
I 6 HOH F 10 2010 2010 HOH HOH . 
I 6 HOH F 11 2011 2011 HOH HOH . 
I 6 HOH F 12 2012 2012 HOH HOH . 
I 6 HOH F 13 2013 2013 HOH HOH . 
I 6 HOH F 14 2014 2014 HOH HOH . 
I 6 HOH F 15 2015 2015 HOH HOH . 
I 6 HOH F 16 2016 2016 HOH HOH . 
I 6 HOH F 17 2017 2017 HOH HOH . 
I 6 HOH F 18 2018 2018 HOH HOH . 
I 6 HOH F 19 2019 2019 HOH HOH . 
I 6 HOH F 20 2020 2020 HOH HOH . 
I 6 HOH F 21 2021 2021 HOH HOH . 
I 6 HOH F 22 2022 2022 HOH HOH . 
I 6 HOH F 23 2023 2023 HOH HOH . 
I 6 HOH F 24 2024 2024 HOH HOH . 
I 6 HOH F 25 2025 2025 HOH HOH . 
I 6 HOH F 26 2026 2026 HOH HOH . 
J 6 HOH G 1 2001 2001 HOH HOH . 
J 6 HOH G 2 2002 2002 HOH HOH . 
J 6 HOH G 3 2003 2003 HOH HOH . 
J 6 HOH G 4 2004 2004 HOH HOH . 
J 6 HOH G 5 2005 2005 HOH HOH . 
J 6 HOH G 6 2006 2006 HOH HOH . 
J 6 HOH G 7 2007 2007 HOH HOH . 
J 6 HOH G 8 2008 2008 HOH HOH . 
J 6 HOH G 9 2009 2009 HOH HOH . 
J 6 HOH G 10 2010 2010 HOH HOH . 
J 6 HOH G 11 2011 2011 HOH HOH . 
J 6 HOH G 12 2012 2012 HOH HOH . 
J 6 HOH G 13 2013 2013 HOH HOH . 
J 6 HOH G 14 2014 2014 HOH HOH . 
J 6 HOH G 15 2015 2015 HOH HOH . 
J 6 HOH G 16 2016 2016 HOH HOH . 
J 6 HOH G 17 2017 2017 HOH HOH . 
J 6 HOH G 18 2018 2018 HOH HOH . 
J 6 HOH G 19 2019 2019 HOH HOH . 
J 6 HOH G 20 2020 2020 HOH HOH . 
J 6 HOH G 21 2021 2021 HOH HOH . 
J 6 HOH G 22 2022 2022 HOH HOH . 
J 6 HOH G 23 2023 2023 HOH HOH . 
J 6 HOH G 24 2024 2024 HOH HOH . 
J 6 HOH G 25 2025 2025 HOH HOH . 
J 6 HOH G 26 2026 2026 HOH HOH . 
#
_atom_site.group_PDB             HETATM 
_atom_site.id                    1 
_atom_site.type_symbol           ZN 
_atom_site.label_atom_id         ZN 
_atom_site.label_comp_id         ZN 
_atom_site.label_seq_id          . 
_atom_site.label_alt_id          . 
_atom_site.pdbx_PDB_ins_code     . 
_atom_site.label_asym_id         D 
_atom_site.label_entity_id       4 
_atom_site.Cartn_x               26.19 
_atom_site.Cartn_y               16.666 
_atom_site.Cartn_z               11.38 
_atom_site.occupancy             1 
_atom_site.B_iso_or_equiv        22.82 
_atom_site.pdbx_formal_charge    2 
_atom_site.auth_atom_id          ZN 
_atom_site.auth_comp_id          ZN 
_atom_site.auth_seq_id           1484 
_atom_site.auth_asym_id          A 
_atom_site.pdbx_PDB_model_num    1 
#
_model_server_stats.io_time_ms              20 
_model_server_stats.parse_time_ms           21 
_model_server_stats.create_model_time_ms    2 
_model_server_stats.query_time_ms           293 
_model_server_stats.encode_time_ms          2 
_model_server_stats.element_count           1 
#