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Commits on Aug 29, 2024

• Merge pull request #15 from wslh-bio/dev-calculate_ncbi_stats

  evagunawan

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  a851229
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Commits on Aug 13, 2024

• Changed logging bacck to info instead of debug

  evagunawan

  committed
  8b140ed
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• Updated to fix MLST scheme and GC content issue.

  evagunawan

  committed
  a133bda
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Commits on Aug 1, 2024

• Added up to date val file to compare to.

  evagunawan

  committed
  9ea67f9
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• CHange logging to info

  evagunawan

  committed
  ff1f1b6
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• Updated to process gc properly

  evagunawan

  committed
  1f0d554
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• Working on stdev code

  evagunawan

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  c5f8456
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Commits on Jul 31, 2024

• working on validation gc and assembly stats

  evagunawan

  committed
  aa7fd41
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• Updated to shorthand

  evagunawan

  committed
  8f7f915
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• Working on validate script

  evagunawan

  committed
  cda3b2b
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• Put column headers at top

  evagunawan

  committed
  be3017d
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• Update diagram

  AbigailShockey

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  64a5714
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Commits on Jul 30, 2024

• Added in GC content processing in spriggan workflow and results.nf

  evagunawan

  committed
  200f60f
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• Added additional column info per request

  evagunawan

  committed
  6a9a8ce
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• Added GC content python script

  evagunawan

  committed
  8ea1bcf
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• Added additional expected length parameter per request

  evagunawan

  committed
  4f5d80f
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• added gc summary nf script

  evagunawan

  committed
  2d83af7
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Commits on Jul 29, 2024

• Added up to date spriggan workflow

  evagunawan

  committed
  4383d0b
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Commits on Jul 26, 2024

• Updated Assembly calculations info

  evagunawan

  committed
  4cf4719
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• Added column name for ratio

  evagunawan

  committed
  64486c4
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• Updated results module to intake assembly stats path

  evagunawan

  committed
  673e2ef
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• Renamed calc stats file

  evagunawan

  committed
  69d8493
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• Created assembly stats summary module

  evagunawan

  committed
  96d8a11
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• Updated output of assembly ratio script

  evagunawan

  committed
  e917e1d
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• Created assembly stats summary script

  evagunawan

  committed
  517259d
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• Added sample name column to output

  evagunawan

  committed
  23c44eb
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Commits on Jul 25, 2024

• Added updated pipeline graphic.

  evagunawan

  committed
  2416c9c
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• Updated filetype output in tree for calculate

  evagunawan

  committed
  d92aca9
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• Updated output file type for calculate

  evagunawan

  committed
  06617b4
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• Added in hyperlink information and fixed missing periods.

  evagunawan

  committed
  e932177
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• Added calculate module output to tree structure

  evagunawan

  committed
  d008729
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• Added an assembly calculations section to workflow outline.

  evagunawan

  committed
  165e13a
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• Changed logging to info

  evagunawan

  committed
  60bf863
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• Moved header to top

  evagunawan

  committed
  41747d8
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• Added in expected:actual ratio

  evagunawan

  committed
  f45992c
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