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Issues list

BWA/Fermi submodules need update for GCC 10
#66 opened Dec 15, 2022 by julianhess updated Dec 15, 2022
function ProperOrientation() have a bug?
#61 opened Jan 14, 2021 by linhxxx updated Jan 14, 2021
Name space pollution - there is another seqlib
#56 opened Jun 4, 2020 by tillea updated Jan 8, 2021
4
BamReader::SetCramReference
#34 opened Dec 21, 2018 by agraubert updated Feb 24, 2020
3
Version 1.1.2 has changed API
#24 opened May 23, 2018 by tillea updated Feb 23, 2020
1
The link to the doxygen API is broken
#55 opened Feb 3, 2020 by rkostadi updated Feb 3, 2020
Undefined Constructor for template class GenomicRegionCollection
#54 opened Dec 30, 2019 by yonghanyu updated Dec 31, 2019
1
heap-buffer-overflow
#52 opened Aug 18, 2019 by Ahhgust updated Aug 18, 2019
BamRecord's PositionEnd() inconsistent with Position()
#49 opened Jun 13, 2019 by Ahhgust updated Jun 13, 2019
determine if a quality string is empty
#48 opened Jun 4, 2019 by ekg updated Jun 4, 2019
Looking for functionalities to replace BamTools with SeqLib
#47 opened Jun 4, 2019 by PauchardL updated Jun 4, 2019
SeqLib::BamWriter.WriteRecord() seems to be truncating the qname field
#33 opened Dec 7, 2018 by bkohrn updated Dec 7, 2018
2
Paired end/mate mair reads
#18 opened Mar 17, 2017 by Ahhgust updated Sep 28, 2018
4
Add different modes to BamWriter.Open
#26 opened Aug 23, 2018 by 1dayac updated Aug 27, 2018
2
Could you settle with official bwa and fermi-lite libraries
#13 opened Jan 27, 2017 by tillea updated May 23, 2018
18
Close CRAM reference
#23 opened Feb 16, 2018 by rwdavies updated Feb 20, 2018
7
incomplete error handling
#19 opened Apr 18, 2017 by brentp updated May 14, 2017
5
Fermi assembler issue
#16 opened Mar 1, 2017 by Ahhgust updated Mar 3, 2017
1
Benchmark run without optimization?
#12 opened Jan 5, 2017 by h-2 updated Jan 6, 2017
9
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