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satijalab / seurat

R toolkit for single cell genomics

R 2,200 894 Updated Jul 22, 2024

therneau / survival

Survival package for R

R 376 101 Updated Jul 25, 2024

satijalab / seurat-wrappers

Community-provided extensions to Seurat

R 290 125 Updated Jun 12, 2024

kpatel427 / YouTubeTutorials

R 242 114 Updated Jul 5, 2024

junjunlab / ClusterGVis

One-step to Cluster and Visualize Gene Expression Matrix

R 202 16 Updated Jul 25, 2024

raerose01 / deconstructSigs

deconstructSigs

R 138 47 Updated Apr 24, 2023

kgori / sigfit

Flexible Bayesian inference of mutational signatures

R 33 8 Updated Jan 30, 2023

eyzhao / hrdetect-pipeline

R 32 14 Updated Jul 28, 2019

thomasvangurp / epiGBS

Code for working with epiGBS data

R 10 7 Updated Jan 26, 2020

chris-kreitzer / Y_chromosome_loss

PanCancer investigation of Y chromosome loss

R 4 1 Updated Jul 17, 2023

iditam / CompareNPPs

R 3 1 Updated May 31, 2022

jingyaqiu / ifnar_epigenome

Processing and analysis scripts for Xu Qiu manuscript

R 3 5 Updated Jul 9, 2023

qingjian1991 / THindex

Tumor Heterogeneity Index Estimating

R 2 Updated Jul 11, 2024

chris-kreitzer / IMPACT_Prostate

R 1 1 Updated Jun 15, 2023

bayesmendel / snipR

R 1 Updated Jan 24, 2022

qingjian1991 / scRNA-seq_online

Forked from hbctraining/scRNA-seq_online
R 1 Updated Feb 17, 2023