- Pisa, Italy.
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06:09
(UTC +02:00) - njagi.me
- @urbanslug
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junctions Public
Compare pangenomes using ED-Strings
C++ GNU General Public License v3.0 UpdatedJul 17, 2024 -
povu Public
Forked from pangenome/povusketch of bubble detection via dominator trees
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aedso Public
Generate an EDS from a VCF and Fasta
Rust GNU General Public License v3.0 UpdatedJan 27, 2023 -
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dsa Public
Degenerate String Aligner based on dwflambda
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dwflambda Public
wfλ for degenerate texts
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wfa Public
Rust WFA and WFλ
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mutatrix Public
Forked from ekg/mutatrixgenome simulation across a population with zeta-distributed allele frequency, snps, insertions, deletions, and multi-nucleotide polymorphisms
C++ MIT License UpdatedMar 24, 2022 -
ndarray-to-img Public
Visualize (sparse) matices
Rust GNU General Public License v3.0 UpdatedMar 23, 2022 -
wflambda Public
Rust implementation of wflambda.
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wffilter Public
Filter over local alignments with a global alignment.
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wai-devel Public
A development server for wai applications.
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ALeS Public
Forked from lucian-ilie/ALeSALeS: Adaptive-length spaced-seed design
C++ GNU General Public License v3.0 UpdatedMay 16, 2021 -
wflign Public
Forked from ekg/wflignthe we-flyin WFA-guided ultralong tiling sequence aligner
C++ MIT License UpdatedMay 13, 2021 -
wfmash Public
Forked from waveygang/wfmashbase-accurate DNA sequence alignments using WFA and mashmap2
C++ MIT License UpdatedApr 26, 2021 -
MashMap Public
Forked from marbl/MashMapA fast approximate aligner for long DNA sequences
C++ Other UpdatedApr 22, 2021 -
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nested-data-structure-traversal Public
Forked from tjpalmer/nested-data-structure-traversalElixir UpdatedApr 16, 2021 -
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pggb Public
Forked from pangenome/pggbthe pangenome graph builder
Shell MIT License UpdatedMar 30, 2021 -
guix-genomics Public
Forked from ekg/guix-genomicsguix packages for bioinformatics software
Scheme UpdatedMar 18, 2021 -
lastz Public
Forked from lastz/lastzProgram for aligning DNA sequences, a pairwise aligner.
C MIT License UpdatedMar 15, 2021 -
Bandage Public
Forked from rrwick/Bandagea Bioinformatics Application for Navigating De novo Assembly Graphs Easily
C++ GNU General Public License v3.0 UpdatedMar 2, 2021