Code of the visualization tool extracted from the BD-PATH website.
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Updated
Mar 18, 2022 - JavaScript
Code of the visualization tool extracted from the BD-PATH website.
Repository of MATLAB implemented image processing tools
This repository is to showcase my experience in the field of medical visualization as a research assistant under the supervision of Prof. Dr. Sylvia Saalfeld.
Keras unet and then chromogen analysis for prostate histopathology images.
Repository of code for deep learning approaches on WSIs, IHC, H&E, etc.
AI competition for predicting Lymph node metastasis of breast cancer
A GAN approach for improving segmentation of WSI Images.
Python 3 Package for optimally sampling big images with texture-aware patchification based on SLIC superpixels. So Sleek !
PathoPatcher is a Python project designed for accelerating Whole Slide Image Preprocessing, employing AI-based preprocessing techniques with features like annotation handling, color normalization, and configurable parameters
A plugin for TensorBoard to show WSI images. The plugin is based on Deep Zoom Image (DZI).
Given an image of cells from a WSI, identify the mitotic figures and return a mitotic index.
Automated batch processing for tissue microscopy image data
Integrative Spatial Analysis of H&E and IHC Images Identifies Prognostic Immune Subtypes correlated with Progression Free Survival in HPV-Related Oropharyngeal Squamous Cell Carcinoma
This is a viewer app that provides using to zoom and pan tools Deep Zoom Image (dzi) or Whole Slide Image (wsi) using Electron JS and OpenSeaDragon .
Breast Cancer Image Classification On WSI With Spatial Correlations https://teacher.bupt.edu.cn/zhuchuang/en/index.htm
DeeperHistReg - Source Code
[ESWA 2023] Implementation of DSCA: A Dual-stream Network with Cross-attention on Whole-Slide Image Pyramids for Cancer Prognosis
The code for Kernel attention transformer (KAT)
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