WikiPathways Database
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Updated
Sep 5, 2024 - Shell
WikiPathways Database
This ebook has information about life science databases, their SPARQL endpoints, what information they hold, what data models they use, and how to query those.
Python Client Package for WikiPathways
Repository for code to create the Europe PMC external links
Project to convert content of WPRDF into nanopublications.
Temporary repository of RDF of selected pathways from WikiPathways, supporting the Wikidata bot.
Deposited R scripts allow to execute a complete RNA-seq Pipeline, starting from sequence reads (FASTQ files) to mapping/annotate the genome using a reference, to counts the number of reads for every gene. when raw counts are obtained, DESeq2 module permits to find differentially expressed genes (DEG) and to perform statistical analysis. The last…
Converts Reactome pathways to GPML format
OpenAPI to extract information from WikiPathways.
Ready-to-use curated genesets for cinaR
Integration of pathway-related information from WikiPathways in BEL
Collect chemical reactions from a GPML file and look for matching Rhea equations.
WikiPathways Summit Planning
R client package for the WikiPathways API.
Add a description, image, and links to the wikipathways topic page so that developers can more easily learn about it.
To associate your repository with the wikipathways topic, visit your repo's landing page and select "manage topics."