ZJUFanLab / SpaTalk Star 58 Code Issues Pull requests Knowledge-graph-based cell-cell communication inference for spatially resolved transcriptomic data knowledge-graph single-cell spatial-data-analysis spatial-transcriptomics graph-network cell-cell-interaction cell-cell-communication ligand-receptor-interaction spatially-resolved-transcriptomics Updated Jun 14, 2024 R
lmweber / PrinciplesSTA Star 36 Code Issues Pull requests 'Principles of Spatial Transcriptomics Analysis with Bioconductor' book bioconductor analysis-workflows spatial-transcriptomics spatially-resolved-transcriptomics Updated Sep 28, 2024 TeX
Honchkrow / Space Star 1 Code Issues Pull requests Reconciling Multiple Spatial Domain Identification Algorithms via Consensus Clustering consensus-clustering spatially-resolved-transcriptomics spatial-domain-identification Updated Sep 27, 2024 HTML
multitalk / MouseLR-atlas Star 0 Code Issues Pull requests A single-cell spatial-temporal transcriptomic atlas of normal and fibrotic liver regeneration scrna-seq spatially-resolved-transcriptomics liver-regeneration liver-fibrosis spatial-temporal-analysis stereo-seq Updated Nov 13, 2023 R