Scripts accompanying manuscript "The genomic basis of reproductive and migratory behaviour in a polymorphic salmonid"
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Updated
Sep 20, 2022 - R
Scripts accompanying manuscript "The genomic basis of reproductive and migratory behaviour in a polymorphic salmonid"
Python client for the CAX API. Holmes, E. E and M. Williams. 2023. pycax: a Python client for the Coordinated Assessments data exchange REST API
Transform, query, and merge tabular files with the expressionable command-line tool. This tool is used primarily for gene-expression data.
Jupyter notebooks for DGE results and ontology analysis and visualisation.
A JavaScript interpreter for Homespring
An R package for hosting data & code, and for running the Dam Impact Analysis (DIA) developed by Nieland et al. (2015)
an unfinished game I worked on for my Distributed Computing class in high school
Code and scripts for the RNA-seq analysis of project: Deciphering the cellular roles and dissecting functional regions of UPF3A and UPF3B in human NMD
Simple Nextflow RNA-Seq pipeline
Code, data, and figures for an experimental pathogen exposure study using wood frogs and American bullfrogs
OStatus Specification
A JavaScript toolset for interacting with the OStatus suite of protocols (JS port of tootsuite/ostatus2)
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