A Bio2BEL package for converting ExPASy to BEL
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Updated
Aug 19, 2019 - Python
A Bio2BEL package for converting ExPASy to BEL
A command line tool for identifying conserved lysine modification sites
Provides all known proteins for a given reaction, and ranks them based on how relevant they are for your project.
Split flow imaging microscopes (FlowCam and FlowCam nano) collage images into a single image.
MMIC for extracting and fixing PDB files converted to MMSchema molecules
Algorithms to emulate the synthesis process of proteins.
A protein-glycan benchmark, ready for use with HADDOCK
Fast regex-based protein digestion and unique peptides finder tool
ProtPlot is a tool written in Python used to plot protein contact maps
A Bio2BEL package for converting InterPro to BEL
Provides a Python implementation of the camcoil program (originally written in C) to estimate the random coil chemical shift values from a sequence (string) of amino-acids.
Synthesize those proteins!
UniGet is a tool written in Python used to search, filter, and fetch records from the UniProt database
Snakemake pipeline for searching genomic sequences for those encoding proteins containing domains of choice
UniProt Demo highlights some of the features of the UniProt API and dsome useful analyses with the available data.
Phyton codes for Structural Bioinformatics Questions
Deep learning based solution for predicting which structurally similar group a protein sequence belongs to.
Warning: this tool is in early development stage, use with care.
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