Generating PDB Structure Models via Modeller-Python
-
Updated
Nov 22, 2020 - Python
Generating PDB Structure Models via Modeller-Python
Project for analysis of protein structures in .pdb file format. It calculates some structure parameters and can compare two structures by calculating the RMSD.
A script to generate a tripeptide database. At present, the amino acids of tripeptides produced are not complete
An application for illustrating the relative distances between protein structures.
Python code to color a PDB structure based on parameters from a multiple sequence alignment
Coiled-coil Crick Paramaterization PDB modifier for further design
A Python script to map PDB ID + chain ID to UniProt ID.
Python script that retrives molecular structure data from online databases.
A bunch of parsers for PE and PDB formats in C++
Get the Short Macromolecular level Summary for mmCIF file.
Download pdb/protein structures using Uniprot id; This script will download related PDB files, extract chains(Optional), remove duplicates(Optional, maybe lost some conformation changed structures) and save as "UniprotID-PDBID-ModelID-ChainID.pdb/cif".
Add a description, image, and links to the pdb-structure topic page so that developers can more easily learn about it.
To associate your repository with the pdb-structure topic, visit your repo's landing page and select "manage topics."