Repository of useful Quarto documents for OHDSI projects

Some scratch work looking at cohort_era logic in OHDSI

FHIR server that transforms QuestionnaireResponses to OHDSI OMOP CDM.

OHDSI data processor used to generate various features from EHRs (Electronic Health Records). It was developed and deployed for EHR Morbidity DREAM Challenge.

ATLAS is an open source software tool for researchers to conduct scientific analyses on standardized observational data

The SQL Server project for OHDSI database CDM format

During the pandemic countries in the African region used data systems they built on top of the WHO Integrated Disease Surveillance and Response (IDSR) framework to track COVID-19 and formulate public health responses. Our IDSR project wrangles these data systems into instances of a common data model and conducts network research on top of them.

Abstract for OHDSI European Symposium 2023

A repository for hosting an OHDSI Google Search webpage

SQLAlchemy Declarative Mapping Models for OHDSI OMOP CDM

GORM models and APIs for CDM v 6.0

Deletion of unwanted content from OMOP CDM

🐋 OHDSI stack Docker configuration

Custom Airflow operators and hooks, that help to upload our raw hospital data to Google Cloud.

A set of document templates facilitating efficient implementation and operation of an OMOP/OHDSI installation

This repo contains analysis performed for paper "A comparative patient-level prediction study in OMOP CDM – insights from study on synthetic data".

OHDSI Vocabulary to RDF converter

Pure Julia implementation of the OMOP Common Data Model (CDM)

tool to facilitate the setup and ongoing maintenance of OHDSI & EHDEN tool deployments