A capstone project at UBC for automating drug injection into microfluidic devices. The automation included using linear actuators and automatic syringe pump to program experiments that required manual pipetting.
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Updated
Aug 31, 2016 - C#
A capstone project at UBC for automating drug injection into microfluidic devices. The automation included using linear actuators and automatic syringe pump to program experiments that required manual pipetting.
microfluidic image stack processing - boxdetection function, detects rectangular growth structures
Microfluidic Applications for Research in Synbio
Flexible and disposable paper and plastic-based gel micropads for nematode handling, imaging and chemical testing
CYCASP is a methodology for investigating and understanding (C)olon(Y) growth and (C)ell (A)ttributes at the population level. It couples (SP)atiotemporal changes by relying on two novel data abstractions and a modular algorithm.
SeeVIS is a (S)egmentation-fr(ee) (VIS)ualization pipeline for time-lapse image data. It comprises three steps: 1. preprocessing, 2. feature extraction, and 3. an extended version of the space time cube with three novel color mappings adapted to cell colony growth.
Related protocols and codes to the project of growing Plants on Chip (Sakai et al., Plant Methods, 2019)
Open-source autosampler and fraction collector for microfluidic applications
Designs used in the 3DuF paper
impedimetric Droplet Measurement
References and supplemental material for for projects involving programming of a microfluidics array
Parameter estimation of seeding and contamination rates on a triangular lattice using the method of simulated moments (MSM).
A more modular Fluigi Codebase
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