micro-ct
Here are 17 public repositories matching this topic...
Software for processing output of Scanco uCT machines/ any ISQ or TIF producing machine, and producing data. See instructions.pdf for full explaination.
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Jun 12, 2019 - MATLAB
Deep-Learning for Tidemark Segmentation in Human Osteochondral Tissues Imaged with Micro-computed Tomography
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Aug 30, 2019 - Python
OpenFOAM solver for performing single- and two-phase flow simulations on hybrid-scale porous media.
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Apr 5, 2021 - C++
Converts any image stack to a Stratovan Checkpoint file (*.ckpt) keeping specimen names and voxel sizes.
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Sep 7, 2021 - ImageJ Macro
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Jun 25, 2024 - C++
GUI-based neuronal network model building
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Feb 10, 2023
The notebook demonstrates the workflow for obtaining pore size distribution from binarized micro-CT images. The general principle involves identifying each pore, estimating the volume of each pore, and ultimately determining the radius of a sphere with an equivalent volume of each pore.
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May 29, 2023 - Jupyter Notebook
ImageJ/Fiji macro that crops any given image stack without having to load it into memory first.
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Jul 18, 2023 - ImageJ Macro
Code used to analyze adaptive decoupling in insects.
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Nov 20, 2023 - R
Direct pore-scale simulation of single- and two-phase flow through confined media (alpha-release / experimental)
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Dec 1, 2023 - C
Library for performing multiphase simulations (based on the Shan-Chen model) in complicated geometries (i.e. porous media 3D images)
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Dec 1, 2023 - Python
ITK Image IO for Scanco MicroCT .ISQ files
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Jun 25, 2024 - C++
Reconstruction and image processing of micro-CT/nano-CT data taken at SPring-8 and APS Argonne.
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Jun 9, 2024 - C++
ITK filters to reduce ring artifacts common in x-ray computed tomography.
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Jun 26, 2024 - C++
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Jul 20, 2024 - Shell
Extract ROIs (e.g. nerves, blood vessels) from multi-terabyte cloud-hosted medical scans.
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Jul 26, 2024 - Python
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