CLI for Membrane

Electron based GUI for Membrane

Membrane Analysis

LabVIEW interface for automated collection and processing of analog gas pressure/flow data for graphene nano-pores

LabVIEW interface for automated collection and processing of analog gas pressure/flux data for liquid-gated membranes

Distributed Backup System

Get stats about cryptocurrencies and post them to a spreadsheet

Protein structure prediction of membrane and globular proteins

Monte Carlo simulations of 2D membrane

A univeral P system simulator for membrane computing researchers.

Peripheral Membrane Protein analysis tool

Staritzbichler R, Anselmi C, Forrest LR, Faraldo-Gómez JD. GRIFFIN: A versatile methodology for optimization of protein-lipid interfaces for membrane protein simulations. J Chem Theory Comput. 2011 Apr 12;7(4):1167-1176. doi: 10.1021/ct100576m. PMID: 24707227; PMCID: PMC3972769.

Code relating to my PhD work modelling the intestinal crypt, using Chaste and my own novel model built in MATLAB

for PIC on 5.8GHz communication board

LAMMPS-DATA models for the project A.A. Tsukanov, B. Turk, O. Vasiljeva and S.G. Psakhie. Computational Indicator Approach for Assessment of Nanotoxicity of Two-Dimensional Nanomaterials. Nanomaterials 2022, 12, 650. https://doi.org/10.3390/nano12040650

PyTorch beginner code for UNet

Membrane plugin for ICE protocol

An alternative to pprint for generically visualizing heterogeneous, hierarchical data

Scripts to analyze the data for the paper "An outstanding bacterial membranome requires CRISPR-Cas systems to avoid the intervention of phages" and derive the figures or subfigures shown in the manuscript.