gene-expression
Here are 401 public repositories matching this topic...
ADEPTUS -- differential gene expression signatures of disease
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Aug 11, 2015
Source code associated with "Leveraging global gene expression patterns to predict expression of unmeasured genes"
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Dec 9, 2015 - R
Extracting anatomy-specific gene expression in humans from Bgee
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Mar 8, 2016 - Jupyter Notebook
Scripts and data for re-creating TDM results.
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Mar 16, 2016 - R
Generating expression signatures for disease using STARGEO
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Mar 29, 2016 - Jupyter Notebook
Data and code related to the paper "ADAGE-Based Integration of Publicly Available Pseudomonas aeruginosa..." Jie Tan, et al · mSystems · 2016
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May 26, 2016 - Python
File format for spatial gene data. The file contains a small header, gene expression data and image tiles from a high resolution photo.The header serves as a table of contents. A single image tile can thus be retrieved without having to read the whole file.
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Jul 31, 2016 - C++
Demonstrating how to use OpenSeadragon to create a viewer for displaying colored circles on top of a high resolution photo. The photo tiles and the circle colors are retrieved from a single data file. The example shows gene expression data.
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Aug 14, 2016 - JavaScript
Custom code of research paper "Variation-preserving normalization unveils blind spots in gene expression profiling"
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Oct 26, 2016 - R
A python implementation of Stability NMF
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Nov 23, 2016 - Python
Using Machine Learning to Identify Glioblastoma patients with NF1 inactivation
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Dec 19, 2016 - Python
Active modules for multilayer weighted gene co-expression networks: a continuous optimization approach
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Jan 30, 2017 - R
My PhD thesis: Gene expression signatures for cancer cell line drug sensitivity and patient outcome
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Mar 8, 2017 - PostScript
MOdule Differential Analysis for weighted gene co-expression network
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Mar 18, 2017 - R
Reconstruct a Transcriptional Regulatory Network using the principle of Maximum Entropy.
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Mar 30, 2017 - Julia
NanoString classifier based on NGS training set
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Apr 4, 2017 - R
Archived version of RUVSeq
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Apr 10, 2017 - R
Machine learning for Project Cognoma
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Apr 24, 2017 - Jupyter Notebook
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