Multi-species size-based ecological modelling in R
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Updated
Apr 12, 2024 - R
Multi-species size-based ecological modelling in R
FSA (Fisheries Stock Assessment) package provides R functions to conduct typical introductory fisheries analyses.
Stochastic surplus Production model in Continuous Time
A package for simulating marine mammal abundance and calculating reference points.
Expanding ocean food production under climate change
A bundle of analytics tools for fisheries scientists
R code for the Shiny interface for the Kuskokwim River Chinook salmon In-season Bayesian Risk Assessment Tool (i.e., "the P* Model")
Computer code to accompany "An Introduction to Bayesian Modeling and Inference for Fisheries Scientists
Catch, Length, and Specimen Data Import Program Instructions for at sea survey data for AFSC's Gulf of Alaska and Bering Sea groundfish surveys.
This package helps fisheries scientists collect growth data from calcified structures and back-calculate estimated lengths at previous ages. The package is intended to replace much of the functionality provided by the now out-dated fishBC software.
This repository contains R code for my analysis of the genetic connectivity of Lane Snapper (Lutjanus synagris) across the Gulf of Mexico, the southeastern U.S. coast, and Belize. It includes data filtering, population structure analysis, Hardy-Weinberg equilibrium testing, and gene flow estimation, essential for fisheries management.
A spatially explicit individual-based food web model for a large ecosystem
Data and code used in "Transient demographic dynamics of recovering fish populations shaped by past climate variability, harvest, and management"
A Management Strategy Evaluation (MSE) framework using FLBEIA and Gadget
A spatial overlay tool in R for estimating EU fisheries activities inside or outside spatial restriction areas
Bayesian Yield-Per-Recruit Model in Stan
Slick Decision Analysis
Este aplicativo registra dados de viagens de pesca, incluindo identificação da embarcação, esforço de pesca, capturas, descartes e capturas não intencionais. Visa apoiar na coleta de dados de pesca da frota de longline nas Grandes Unidades Oceânicas do Brasil
Source code to build my dissertation using bookdown
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