ImageJ macros and scripts written at the imaging facility MRI
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Updated
May 21, 2024 - ImageJ Macro
ImageJ macros and scripts written at the imaging facility MRI
ImageJ functions and macros for working with thermal image files
ImageJ / Fiji macro to automatically export Leica LIF file as individual images (batch mode available)
An ImageJ macro for 2D colocalization of IHC signals in ImageJ and counting RNAscope puncta within cells.
an ImageJ toolset for EM image analysis
quantixed FIJI update site + more
Useful scripts for saving multichannel fluorescence images for use in figures and saving relevant metadata
Compilation of ImageJ macros to do a wide variety of functions.
A simple macro to analysis spheroid areas
The MRI workshop about ImageJ macro programming.
ImageJ macros and plugins.
A repository containing ImageJ macros for the Snyder Lab
A simple ImageJ Fiji macro to apply maths to every nth slice in a single-channel image, e.g. average every 5 frames and similar.
MRI ImageJ related python (jython) module.
R-Scripts and Fiji-macro used for the construction of kymographs based on fluorescence profiles
Prairie 2-Photon Microscopy Data Manager for recursive batch processing ans analysis with Fiji
Image process framework to easily analyse fluorescent glioblastoma cells in pattern of neurons.
Fiji macro that splits and merges multi-dimensional TIFFs.
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