PyRoss: inference, forecasts, and optimised control of epidemiological models in Python
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Updated
Jul 11, 2023 - Jupyter Notebook
PyRoss: inference, forecasts, and optimised control of epidemiological models in Python
Modular spatio-temporal models for epidemic and pandemic simulations
DEPRECATED IN FAVOR OF TuringLang/Turing-Workshop
Awesome-spatial-temporal-data-mining-packages. Julia and Python resources on spatial and temporal data mining. Mathematical epidemiology as an application. Most about package information. Data Sources Links and Epidemic Repos are also included. Keep updating.
The companion repository to Computational Modeling of Infectious Disease by Chris von Csefalvay
Forecast COVID 19 trend for three regions in Italy.
Epidemiological modeling in StochSS
We are the AI-Epidemiology Modeling group at UCF. Our work is focused on the efficient integration of deep learning and epidemiological modeling. The website is under construction and will be ready soon.
This repository contains the code for the paper "Infection Rate Models for COVID-19: Model Risk and Public Health News Sentiment Exposure Adjustments", by Ioannis Chalkiadakis, Kevin Hongxuan Yan, Gareth W. Peters, Pavel V. Shevchenko.
Tutorials on math epidemiology and epidemiology informed deep learning methods
A simulation model written in Python for the generation of spatial-temporal clinical data on infection outbreaks in hospitals
Modelling epidemic curve with SIRD model.
[UNDER DEVELOPMENT] R package implementing the DAEDALUS model for projecting and optimising health, social, and economic costs of a pandemic.
The official manual to the epispot package
Code used to produce results and figures for BA Pathology project on the prospects of a BCG vaccine program in Great Britain. Developed by Joanna Vieira O'Neill, University of Cambridge.
Code for the paper "Modelling the SARS-CoV-2 epidemic in Croatia: a comparison of three analytic approaches"
Machine learning algorithms for the calibration of epidemiological compartmental models: application to the Italian COVID-19 outbreaks in Italy and to the newly developed SUIHTER model.
Rumour spreading models on social networks
A simple UI to easily build and run custom epidemic models.
Undergraduate Course Work from Public Health 490KR Epidemiologic Data Management & Analysis, Taught by Professor Katherine W. Reeves, PhD, MPH
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