Supporting Files of paper titled "Dynamic Simulation of Parkinson's Disease and ALS Propagation in the Brain: A Reaction-Diffusion on Brain Networks Approach"
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Updated
Jun 21, 2024 - MATLAB
Supporting Files of paper titled "Dynamic Simulation of Parkinson's Disease and ALS Propagation in the Brain: A Reaction-Diffusion on Brain Networks Approach"
Python 3 implementations of various Functional Connectivity measures
EM Image Reconstruction Tools using Python
Cartographical collection of cortical atlases (neuroscience)
Code and example data for transcriptional-data-guided brain network classification
Solution for CNI Machine Learning Challenge
An essay on comparing 2 ML applications on connectomes
Rapid analysis of scientific papers from bioRxiv and PubMed
Analysis from the point of view of network science of the connectome of the drosophila
LaTeX code for my PhD thesis.
Weakly Object Localization on brain dMRI using CAM
A (soon to be) lightweight Python package for accessing single-cell connectome networks with metadata.
Semantic segmentation architectures for connectomics.
Virtual Fly Brain is the only resource integrating Drosophila neurobiology images, data and knowledge all regions of the nervous system from larva to adult.
The repository for the chapter about NBS-Predict in “Methods for analyzing large neuroimaging datasets” by Springer Nature.
LiFE-GPU-opt software is an optimized implementation of the compute-intensive matrix operations of the LiFE algorithm for GPUs.
Custom MATLAB code for Jun et al. NeuroImage 2022; https://doi.org/10.1016/j.neuroimage.2022.119274
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