MNE-CPP: A Framework for Electrophysiology

GeNN is a GPU-enhanced Neuronal Network simulation environment based on code generation for Nvidia CUDA.

Auryn: A fast simulator for spiking neural networks with synaptic plasticity

Interactive visualization framework for geometrically detailed neuron simulations

Simulating a primordial brain. A biological (spiking) neural network structuring itself through natural selection.

High-performance Spiking Neural Networks Library Written From Scratch with C++ and Python Interfaces.

Nest Simulator quick guides and examples, adding new model using NESTML

C++ API for NeuroML 2

A C++ Library for Point Process Analysis

Code for running CFD simulation of larval zebrafish, and MATLAB code for pre/postprocessing. Accompanies the preprint "Behavioral adaptation to changing energy constraints via altered frequency of movement selection" by T. Darveniza, S.I. Zhu, Z. Pujic, B. Sun, M. Levendosky, R. Wong, R. Agarwal, M. H. McCullough, G. J. Goodhill (2023)

Fast C++ functions for computational neuroanatomy

Original C++ version of emergent: originally hosted under svn at https://grey.colorado.edu/svn/emergent

CUHK MPhil Comp. Neuro. Project, 2022-2024

A visual simulation of the Hindmarsh-Rose neuron model.

A C++ program to simulate the neuronal network model described in Rossoni et al. (2008) Emergent Synchronous Bursting of Oxytocin Neuronal Network. PLoS Comput Biol 4(7)

Artificial Biological Intelligence