a project for fulfillment of M.Sc in Bioinformatics
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Updated
Jan 26, 2022 - R
a project for fulfillment of M.Sc in Bioinformatics
Taxonomy Classifer Using Gene Sequence.
ECS 124 - Theory and Practice of Bioinformatics
Python scripts for Bioinformatics applications
Useful tools for Full-Length RNA analysis.
A short script for searching in Uniprot using RESTful APIs
A specimen randomizer for blind analysis
A Haskell script for creating random single nucleotide variants within genomic region(s) using a genomic window string.
Shell script to post-process OrthoFinder's output into pairwise tables used in macrosyntR
Sequence Alignment tool
A Haskell script that performs hierarchical filtering on a tab-delimited file across groups of lines based on user-defined hierarchical filtering string.
Tool to remove PCR duplicates
Programas usados em BioInformática
Scripts for Basecalling on GridION Sequenicng machines from Oxford Nanopore
CocoTF: a workflow to identify context specific co-occurring TF motifs using bedtools, Homer and R packages.
A script that efficiently processes multiple '.fastq' files, automatically organizing the pre-trimmed output into a folder named 'qc_reports_pretrim' for streamlined quality control and sequence data analysis.
Tool for easily downloading and quantifying RNAseq data from the European Nucleotide Archive (ENA) with Salmon.
A Haskell script that performs knuth-morris-pratt string search across a region of fasta file for ambiguity codes, and determines whether variants are found in ambiguity codes.
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