Source code of the Bgee pipeline used to build the Bgee database
-
Updated
Jun 7, 2024 - Perl
Source code of the Bgee pipeline used to build the Bgee database
🔬 R package: Analysis of Large Affymetrix Microarray Data Sets
A collection of miscellaneous bioinformatics scripts
Affymetrix OncoScan / OncoScan_CNV processing using apt-copynumber-onco-ssa (2.4.0)
Analysis of gene expression in umbilical cord blood from ASD, Non-TD, and TD subjects in the MARBLES and EARLI studies
Various python programs I use for the manipulation of SNP genotype datasets and other bioinformatics tasks. This repository features miscellaneous scripts to help work efficiently in common bioinformatics tasks I encounter. Use at own risk
Affymetrix CytoScan (750k / HD) processing using apt-copynumber-cyto-ssa (2.4.0)
App to illustrate the history of transcript cluster annotations of the Affy array HTA2.0
Gene expression experiments using Python and R
R scripts & functions for SNP data analysis of genotyping data from Affymetrix Axiom arrays
Microarray Analysis of Differential Expression
Differential Expression Analysis Pipeline
Find shared SNPs between different microarray chips
Affymetrix GenomeWideSNP_6 processing using apt-copynumber-workflow (1.20.0)
Creates a GCT file from a set of CEL files from Affymetrix ST arrays.
read Affymetrix .CEL files
Add a description, image, and links to the affymetrix topic page so that developers can more easily learn about it.
To associate your repository with the affymetrix topic, visit your repo's landing page and select "manage topics."