Commits

Commits on May 28, 2024

Merge pull request #15 from tmaklin/v0.7.0-testing
tmaklin
committedMay 28, 2024
Revert changes to library output path
tmaklin
committedMay 28, 2024
Merge pull request #14 from tmaklin/compress-plaintext-alignments
tmaklin
committedMay 28, 2024
Merge pull request #13 from tmaklin/build-system-patch-1
tmaklin
committedMay 28, 2024
Enable bitmagic compression when reading plaintext alignments.
tmaklin
committedMay 28, 2024
Update build pipeline + some dependencies.
tmaklin
committedMay 28, 2024

Commits on Sep 4, 2023

Fix include dir names.
tmaklin
committedSep 4, 2023
Fix typo.
tmaklin
committedSep 4, 2023
Name liblzma consistently with find_package.
tmaklin
committedSep 4, 2023
Name the zlib library similarly to what find_package uses.
tmaklin
committedSep 4, 2023
Check that find_package has not been run before attempting to include from custom path.
tmaklin
committedSep 4, 2023
Update cmake file
tmaklin
committedSep 4, 2023

Commits on Jun 30, 2023

Merge pull request #12 from tmaklin/v0.6.2
tmaklin
committedJun 30, 2023
Update alignment writer to v0.4.0
tmaklin
committedJun 30, 2023

Commits on Apr 21, 2023

Commits on Feb 1, 2023

Commits on Jan 31, 2023

Adapt the group indicators vector type in AdaptiveGrouping and templatize the read::ThemistoGrouped function accordingly.
tmaklin
committedJan 31, 2023

Commits on Jan 30, 2023

Implement operator() for accessing the alignment data.
tmaklin
committedJan 30, 2023

Commits on Jan 29, 2023

Commits on Jan 26, 2023

Throw an error if the compact file header does not match the expected numbers
tmaklin
committedJan 26, 2023

Commits on Jan 24, 2023

Add getter for aligned_reads.
tmaklin
committedJan 24, 2023

Commits on Jan 10, 2023

Implement rule of five for GroupedAlignment (manages a dynamically allocated resource).
tmaklin
committedJan 10, 2023

Commits on Jan 9, 2023

Merge pull request #6 from tmaklin/parse-from-buffered-alignments
tmaklin
committedJan 9, 2023
Update readme.
tmaklin
committedJan 9, 2023
Add documentation.
tmaklin
committedJan 9, 2023