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SENSEI.md

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Building SENSEI on Cooley and running Oscillators example

    • Clone the repo in the home directory: git clone https://gitlab.kitware.com/sensei/sensei.git src
    • Use the correct configuration of cmake while in the home directory: cmake -B ./build -S ./src -DCMAKE_CXX_COMPILER=which g++ -DCMAKE_C_COMPILER=which gcc -DCMAKE_INSTALL_PREFIX=./install -DENABLE_SENSEI=ON -DENABLE_VTK_IO=ON -DENABLE_CATALYST=ON -DParaView_DIR="/lus/grand/projects/visualization/srizzi/BUILDS/paraview/build/install/lib/cmake/paraview-5.9/"
    • Build Sensei. There should be a build directory in your home directory that was created by the cmake command: cd build
      make -j8
    • Install. While in the build directory: make install

  5. Copy oscillator executable (found in build/bin) to build/miniapps.

  6. Copy oscillator.xml in src/configs to build/miniapps

  7. Copy sample.osc from src/miniapps/oscillators/inputs into build/miniapps

  8. Enable PosthocIO and disable any libsim in oscillator.xml

NOTE: I copied the required files into build/miniapps, but this is not necessary. You just need to use the correct paths otherwise.

  1. in build/miniapps: export LD_LIBRARY_PATH=/lus/grand/projects/visualization/srizzi/BUILDS/paraview/build/install/lib:$LD_LIBRARY_PATH and then mpirun -n 2 ./oscillator -b 2 -p 0 -f oscillator.xml sample.osc