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This is an issue that's been present in SBML since the beginning, but only relatively recently appreciated: it's possible to have a species concentration with a rate of change, and simultaneously have its compartment volume changing with a different rate of change. There's a stackoverflow question on this where I describe what the math should be:
This is an issue that's been present in SBML since the beginning, but only relatively recently appreciated: it's possible to have a species concentration with a rate of change, and simultaneously have its compartment volume changing with a different rate of change. There's a stackoverflow question on this where I describe what the math should be:
https://stackoverflow.com/questions/62703123/simulating-the-sbml-models-with-coupled-compartment-and-species-rate-rules/
We need to incorporate this into roadrunner, then re-enable those tests from the test suite.
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