Utrecht atmospheric moisture tracking model

Script to open and plot results from the UTrack global climatology

Open-Meteo on AWS Open Data

A command line tool for downloading unrestricted data files from ESGF

An R Framework for Climate Data Access and Post-processing

Render bits of R code for sharing, e.g., on GitHub or StackOverflow.

A Docker image to run Stan, cmdstanr, and brms for Bayesian statistical modelling

Python application to generate self-contained pages embedding IGV visualizations, with no dependency on original input files.

Docker base package for rstan

Long list of geospatial tools and resources

TODOr - RStudio add-in for finding TODO, FIXME, CHANGED etc. comments in your code.

An R 📦 for getting point and gridded climate data by AOI

DensityMap is perl tool for the visualization of features density along chromosomes

Functional annotation pipeline for proteins from non-model organisms implemented in Nextflow

Red: an intelligent, rapid, accurate tool for detecting repeats de-novo on the genomic scale.

RNA-Seq analysis workflow

Phylogenetic analysis in R

Phylogenetic inference using Stan

R package for building customizable CVs from spreadsheets

Bayesian Phylogenetic Inference Using Graphical Models and an Interactive Model-Specification Language

Bayesian haplotype-based mutation calling

Pipeline to generate NGS reads from a phylogeny

simuG: a general-purpose genome simulator

A wrapper around Cutadapt and FastQC to consistently apply adapter and quality trimming to FastQ files, with extra functionality for RRBS data

Strelka2 germline and somatic small variant caller