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MIC 🏥

27 repositories

Repository for the paper titled "Shape Matters: Detecting Vertebral Fractures Using Differentiable Point-Based Shape Decoding"

Python 2 Updated Jan 10, 2024

[ECCV 2024] ScribblePrompt: Fast and Flexible Interactive Segmentation for Any Medical Image

Jupyter Notebook 113 9 Updated Jul 11, 2024

Toolbox to integrate optimal transport loss functions using automatic differentiation and Sinkhorn's algorithm

Python 426 38 Updated May 14, 2018

Optimal transport tools implemented with the JAX framework, to get differentiable, parallel and jit-able computations.

Python 497 80 Updated Sep 3, 2024

[ICML 2022]Source code for "A Closer Look at Smoothness in Domain Adversarial Training",

Python 66 12 Updated Apr 11, 2024

Flax is a neural network library for JAX that is designed for flexibility.

Python 5,929 628 Updated Sep 5, 2024

SSG-VQA is a Visual Question Answering (VQA) dataset on laparoscopic videos providing diverse, geometrically grounded, unbiased and surgical action-oriented queries generated using scene graphs.

Python 28 1 Updated Aug 29, 2024

panoptica -- instance-wise evaluation of 3D semantic and instance segmentation maps

Python 17 4 Updated Sep 5, 2024

A Framework for Systematic Validation of Uncertainty Estimation in Semantic Segmentation

Python 24 1 Updated May 14, 2024

The official website for uniGradICON: A Foundation Model for Medical Image Registration

Python 64 3 Updated Aug 22, 2024

A Python package housing a collection of deep-learning multi-modal data fusion method pipelines! From data loading, to training, to evaluation - fusilli's got you covered 🌸

Python 155 13 Updated Sep 5, 2024

Light and Optimal Schrödinger Bridge Matching (ICML 2024) official PyTorch implementation=

Python 28 4 Updated Aug 8, 2024

[MICCAI 2023] MedNeXt is a fully ConvNeXt architecture for 3D medical image segmentation.

Python 315 24 Updated Apr 22, 2024

3D Slicer extension for Segment Anything Model (SAM) developed by Meta

Python 23 6 Updated Aug 25, 2024

Medical Image Radiomics Processor

Python 49 13 Updated Aug 23, 2024
Python 86 12 Updated Aug 22, 2024

A fast, lightweight 3D viewer for Python based on WGPU

Python 43 1 Updated Aug 31, 2024

Visualize streams of multimodal data. Fast, easy to use, and simple to integrate. Built in Rust using egui.

Rust 6,205 287 Updated Sep 5, 2024

Code release for CVPR'24 submission 'OmniGlue'

Python 514 42 Updated Aug 12, 2024

Segment Anything in High Quality [NeurIPS 2023]

Python 3,630 218 Updated Jul 7, 2024

Geometry Processing Library for Python

C++ 1,879 358 Updated Aug 8, 2024

Python library for loading and using triangular meshes.

Python 2,929 574 Updated Sep 4, 2024

A PyTorch Library for Accelerating 3D Deep Learning Research

Python 4,412 540 Updated Aug 27, 2024

A collection of utility functions to prototype geometry processing research in python

Python 193 16 Updated Aug 9, 2024

The repository provides code for running inference with the Meta Segment Anything Model 2 (SAM 2), links for downloading the trained model checkpoints, and example notebooks that show how to use th…

Jupyter Notebook 10,395 819 Updated Aug 21, 2024

Subtype and Stage Inference (SuStaIn) algorithm with an example using simulated data.

Jupyter Notebook 122 63 Updated Apr 26, 2023