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Useful tools

16 repositories

add statistical significance annotations on seaborn plots. Further development of statannot, with bugfixes, new features, and a different API.

Python 661 73 Updated Jul 31, 2024

Processing Library and Analysis Toolkit for Medical Imaging in Python

Python 115 27 Updated Sep 26, 2024

This extension makes available Elastix medical image registration toolkit (https://elastix.isi.uu.nl/) available in Slicer.

Python 48 29 Updated Apr 25, 2024

A MATLAB toolbox for exporting publication quality figures

MATLAB 1,269 365 Updated May 9, 2024

Official elastix repository

C++ 480 116 Updated Oct 16, 2024

Mirror of the official elastix SVN repository

C++ 2 4 Updated Feb 21, 2017

Multi-lingual medical image registration library

SWIG 511 149 Updated Jun 15, 2023

An ITK Python interface to elastix, a toolbox for rigid and nonrigid registration of images

Python 206 22 Updated Sep 4, 2024

DIPY is the paragon 3D/4D+ imaging library in Python. Contains generic methods for spatial normalization, signal processing, machine learning, statistical analysis and visualization of medical imag…

Python 711 438 Updated Oct 17, 2024

An automated and simple tool for fast quality analysis of animal MRI

Python 3 4 Updated Sep 9, 2024

AI Toolkit for Healthcare Imaging

Python 5,762 1,063 Updated Oct 18, 2024

MONAI Model Zoo that hosts models in the MONAI Bundle format.

Python 192 67 Updated Oct 11, 2024

WhiteStripe Package

R 9 6 Updated May 9, 2024

UKRIN Kidney Analysis Toolbox

Jupyter Notebook 12 4 Updated Oct 2, 2024

Tool to anonymize DICOM files according to the DICOM standard

Python 104 47 Updated Sep 17, 2024

A minimal Python library to facilitate the creation and manipulation of DICOM RTStructs.

Python 197 56 Updated Oct 9, 2024