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Can we figure out the unknown start/stop codons for putative transcripts from proteomics data? #5

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acesnik opened this issue Oct 24, 2017 · 2 comments

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acesnik commented Oct 24, 2017

https://www.biostars.org/p/120617/#121342

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acesnik commented Oct 24, 2017

acesnik added the Question label

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acesnik commented Nov 13, 2018

I think this might be possible with ORF finding... see the LongOrf tool here https://github.com/TransDecoder/TransDecoder/wiki
the docker is here if you want to test it easily https://hub.docker.com/r/comics/transdecoder/

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