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Omnipath extension #147
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Hi @lindsdudley, Can you please share which tutorial is this from? Input data is usually a SingleCellExperiment or Seurat object. Does this help? |
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Hi liana group,
Thank you so much creating this amazing resource. I am trying to extend this to using omnipath to look at specific pathways. I am able to get the omnipath data but I am a little confused about the liana inputs it requires.testdata <-
readRDS(file.path(liana_path , "testdata", "input", "testdata.rds"))
I have an RDS from saving the end of my liana resources but I am confused what the "test_data" and "input" are supposed to be.
Could you please advise?
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