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poetry.lock
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# This file is automatically @generated by Poetry 1.6.1 and should not be changed by hand.
[[package]]
name = "alabaster"
version = "0.7.13"
description = "A configurable sidebar-enabled Sphinx theme"
optional = false
python-versions = ">=3.6"
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name = "anndata"
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description = "Annotated data."
optional = false
python-versions = ">=3.8"
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h5py = ">=3"
natsort = "*"
numpy = ">=1.16.5"
packaging = ">=20"
pandas = ">=1.1.1,<2.0.1 || >2.0.1"
scipy = ">1.4"
[package.extras]
dev = ["pytest-xdist", "setuptools_scm"]
doc = ["IPython", "awkward (>=2.0.7)", "myst_parser", "nbsphinx", "scanpydoc[theme] (>=0.9)", "sphinx (>=4.4)", "sphinx-autodoc-typehints (>=1.11.0)", "sphinx-rtd-theme (>=1.1.1)", "sphinx_issues", "sphinxext.opengraph", "zarr"]
test = ["awkward (>=2.3)", "boltons", "dask[array]", "joblib", "loompy (>=3.0.5)", "matplotlib", "openpyxl", "pytest (>=6.0)", "pytest-cov (>=2.10)", "pytest_memray", "scanpy", "scikit-learn", "zarr"]
[[package]]
name = "appnope"
version = "0.1.4"
description = "Disable App Nap on macOS >= 10.9"
optional = false
python-versions = ">=3.6"
files = [
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[[package]]
name = "attrs"
version = "23.2.0"
description = "Classes Without Boilerplate"
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python-versions = ">=3.7"
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cov = ["attrs[tests]", "coverage[toml] (>=5.3)"]
dev = ["attrs[tests]", "pre-commit"]
docs = ["furo", "myst-parser", "sphinx", "sphinx-notfound-page", "sphinxcontrib-towncrier", "towncrier", "zope-interface"]
tests = ["attrs[tests-no-zope]", "zope-interface"]
tests-mypy = ["mypy (>=1.6)", "pytest-mypy-plugins"]
tests-no-zope = ["attrs[tests-mypy]", "cloudpickle", "hypothesis", "pympler", "pytest (>=4.3.0)", "pytest-xdist[psutil]"]
[[package]]
name = "babel"
version = "2.15.0"
description = "Internationalization utilities"
optional = false
python-versions = ">=3.8"
files = [
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]
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pytz = {version = ">=2015.7", markers = "python_version < \"3.9\""}
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dev = ["freezegun (>=1.0,<2.0)", "pytest (>=6.0)", "pytest-cov"]
[[package]]
name = "backcall"
version = "0.2.0"
description = "Specifications for callback functions passed in to an API"
optional = false
python-versions = "*"
files = [
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name = "backports-zoneinfo"
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description = "Backport of the standard library zoneinfo module"
optional = false
python-versions = ">=3.6"
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[package.extras]
tzdata = ["tzdata"]
[[package]]
name = "beautifulsoup4"
version = "4.12.3"
description = "Screen-scraping library"
optional = false
python-versions = ">=3.6.0"
files = [
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soupsieve = ">1.2"
[package.extras]
cchardet = ["cchardet"]
chardet = ["chardet"]
charset-normalizer = ["charset-normalizer"]
html5lib = ["html5lib"]
lxml = ["lxml"]
[[package]]
name = "bleach"
version = "6.1.0"
description = "An easy safelist-based HTML-sanitizing tool."
optional = false
python-versions = ">=3.8"
files = [
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six = ">=1.9.0"
webencodings = "*"
[package.extras]
css = ["tinycss2 (>=1.1.0,<1.3)"]
[[package]]
name = "bump2version"
version = "1.0.1"
description = "Version-bump your software with a single command!"
optional = false
python-versions = ">=3.5"
files = [
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[[package]]
name = "bumpversion"
version = "0.6.0"
description = "Version-bump your software with a single command!"
optional = false
python-versions = "*"
files = [
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bump2version = "*"
[[package]]
name = "cell2cell"
version = "0.7.4"
description = "TBD"
optional = true
python-versions = "*"
files = [
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gseapy = "1.0.3"
kneed = "*"
matplotlib = ">=3.2.0"
networkx = ">=2.3"
numpy = ">=1.16"
openpyxl = ">=2.6.2"
pandas = ">=1.0.0"
scanpy = "*"
scikit-learn = "*"
seaborn = ">=0.11.0"
statannotations = "*"
statsmodels = "*"
tensorly = "0.8.1"
tqdm = "*"
umap-learn = "*"
xlrd = ">=1.1"
[[package]]
name = "certifi"
version = "2024.7.4"
description = "Python package for providing Mozilla's CA Bundle."
optional = false
python-versions = ">=3.6"
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name = "cffi"
version = "1.16.0"
description = "Foreign Function Interface for Python calling C code."
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python-versions = ">=3.8"
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