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Commits on Jan 28, 2017

• Update README.md

  

  Рудольф

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• Update README.md

  

  Рудольф

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• Update README.md

  

  Рудольф

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• Create README.md

  

  Рудольф

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• .

  

  rudolphyo

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• .

  

  rudolphyo

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• models perf on allele

  

  rudolphyo

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• parsing proteins of mhc from imghtla and preprocess

  

  rudolphyo

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• proteins of mhc

  

  rudolphyo

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• training of multiple w2v.params

  

  rudolphyo

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• clean ipynb with actual results. mhc embed

  

  rudolphyo

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Commits on Dec 23, 2016

• with mhystic

  

  rudolphyo

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Commits on Dec 8, 2016

• grid_search for binary

  

  rudolphyo

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• preprocessing and embedding helper functions moved here.fix

  

  rudolphyo

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Commits on Dec 7, 2016

• preprocessing and embedding helper functions moved here

  

  rudolphyo

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Commits on Nov 4, 2016

• tsne. performance on alleles compared to other models

  

  rudolphyo

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Commits on Oct 11, 2016

• non-scaled performances

  

  rudolphyo

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Commits on Oct 1, 2016

• fast blosum representation of sequences implemented

  

  rudolphyo

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Commits on Sep 27, 2016

• meta-features performance

  

  rudolphyo

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Commits on Sep 26, 2016

• kMeans meta-features added

  

  rudolphyo

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Commits on Sep 25, 2016

• result for embedding

  

  rudolphyo

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• mse metric for performance of models

  

  rudolphyo

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Commits on Sep 23, 2016

• correlation matrix between embedding models

  

  rudolphyo

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  7e3f025
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• more accurate embedding models

  

  rudolphyo

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Commits on Sep 18, 2016

• Doc2Vec on database

  

  rudolphyo

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Commits on Sep 12, 2016

• xgbRegression.GridSearch

  

  rudolphyo

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Commits on Sep 11, 2016

• cross-validation logs. xgboost. tuning

  

  rudolphyo

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• add blosum matrix.

  

  rudolphyo

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• less fits, folds. more dataframes. current auc:0.82

  

  rudolphyo

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Commits on Sep 8, 2016

• main data

  

  rudolphyo

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• grid_seacrh xgb

  

  rudolphyo

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Commits on Sep 3, 2016

• xgb grid search function

  

  rudolph

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Commits on Aug 25, 2016

• nice defs with features

  

  rudolph

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Commits on Jul 30, 2016

• features and additional data preprocessing for final model

  

  Рудольф Лайко

  authored and

  Рудольф Лайко

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• unique_peptides from BData comparing to MHCflurry data

  

  Рудольф Лайко

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  Рудольф Лайко

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