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DeepGO with GOPlus axioms

Um plano de estudos para o aprender machine learning em português

💻 📓 Guia de estudos (iniciante) sobre Inteligência Artificial. Contém trilhas de aprendizagem, canais, cursos , livros etc.

Graph Learning of INTER-protein contacts

ProtTrans is providing state of the art pretrained language models for proteins. ProtTrans was trained on thousands of GPUs from Summit and hundreds of Google TPUs using Transformers Models.

Aggregate results from bioinformatics analyses across many samples into a single report.

BioNetComp: a Python package for biological network development and comparison

Download Blast databases from ftp.ncbi.nlm.nih.gov/blast/db, validate, and extract.

Genome annotation pipeline

BIOINFORMÁTICA APLICADA À GENÔMICA: INTRODUÇÃO À ANÁLISE DE DADOS DE SEQUENCIAMENTO DE NOVA GERAÇÃO

Download FASTQ files from SRA or ENA repositories.

Small utilities for working with fastq sequence files.

Trypanosoma cruzi genome annotation and analysis

The Venn Diagram Plotter draws correctly proportioned and positioned two and three circle Venn diagrams (aka Euler diagrams) whose colors can be customized and the diagrams copied to the clipboard …

ggplot port for python

The Subread software package is a tool kit for processing next-gen sequencing data. It includes Subread aligner, Subjunc exon-exon junction detector and featureCounts read summarization program.

Graph-based alignment (Hierarchical Graph FM index)

A quality control analysis tool for high throughput sequencing data

Windowed Adaptive Trimming for fastq files using quality

A tool for merging transcriptome assemblies via protein homology

Tools for bioinformatics

Multiple Sequence Comparison by Log-Expectation.

Multiple sequence aligner for protein and DNA/RNA.

Tools for multiple alignments of DNA, RNA, and Proteins.