{"payload":{"pageCount":1,"repositories":[{"type":"Public","name":"HiCExplorer","owner":"deeptools","isFork":false,"description":"HiCExplorer is a powerful and easy to use set of tools to process, normalize and visualize Hi-C data.","allTopics":["bioinformatics","genomics","galaxy","hic","chromosome-conformation-capture","python"],"primaryLanguage":{"name":"Python","color":"#3572A5"},"pullRequestCount":1,"issueCount":119,"starsCount":221,"forksCount":68,"license":"GNU General Public License v3.0","participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2024-06-28T09:57:39.691Z"}},{"type":"Public","name":"pyBigWig","owner":"deeptools","isFork":false,"description":"A python extension for quick access to bigWig and bigBed files","allTopics":["bigwig","bigbed","bioinfomatics"],"primaryLanguage":{"name":"C","color":"#555555"},"pullRequestCount":0,"issueCount":11,"starsCount":205,"forksCount":47,"license":"MIT License","participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2024-06-19T09:45:50.596Z"}},{"type":"Public","name":"pyGenomeTracks","owner":"deeptools","isFork":false,"description":"python module to plot beautiful and highly customizable genome browser tracks","allTopics":[],"primaryLanguage":{"name":"Python","color":"#3572A5"},"pullRequestCount":4,"issueCount":23,"starsCount":734,"forksCount":112,"license":"GNU General Public License v3.0","participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2024-06-10T13:50:33.229Z"}},{"type":"Public","name":"HiCMatrix","owner":"deeptools","isFork":false,"description":"","allTopics":[],"primaryLanguage":{"name":"Python","color":"#3572A5"},"pullRequestCount":0,"issueCount":0,"starsCount":11,"forksCount":8,"license":"GNU General Public License v3.0","participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2024-04-30T11:02:26.530Z"}},{"type":"Public","name":"deepTools","owner":"deeptools","isFork":false,"description":"Tools to process and analyze deep sequencing data.","allTopics":["bioinformatics","rna-seq","genomics","ngs","chip-seq","python"],"primaryLanguage":{"name":"Python","color":"#3572A5"},"pullRequestCount":6,"issueCount":124,"starsCount":662,"forksCount":205,"license":"Other","participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2024-04-08T10:43:01.508Z"}},{"type":"Public","name":"github-actions","owner":"deeptools","isFork":false,"description":"Play around with github actions","allTopics":[],"primaryLanguage":{"name":"JavaScript","color":"#f1e05a"},"pullRequestCount":12,"issueCount":0,"starsCount":0,"forksCount":1,"license":"MIT License","participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2023-08-16T14:30:17.402Z"}},{"type":"Public","name":"py2bit","owner":"deeptools","isFork":false,"description":"A python library for accessing 2bit files","allTopics":["bioinformatics","twobit"],"primaryLanguage":{"name":"C","color":"#555555"},"pullRequestCount":0,"issueCount":1,"starsCount":15,"forksCount":8,"license":"MIT License","participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2022-07-29T12:50:49.800Z"}},{"type":"Public","name":"Knight-Ruiz-Matrix-balancing-algorithm","owner":"deeptools","isFork":false,"description":"","allTopics":[],"primaryLanguage":{"name":"C++","color":"#f34b7d"},"pullRequestCount":1,"issueCount":5,"starsCount":9,"forksCount":4,"license":null,"participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2021-04-13T00:50:07.664Z"}},{"type":"Public","name":"HiCBrowser","owner":"deeptools","isFork":false,"description":"Simple web browser to visualize HiC tracks","allTopics":["visualization","docker","bioinformatics","browser","genomics","epigenetics","hi-c","hicexplorer"],"primaryLanguage":{"name":"JavaScript","color":"#f1e05a"},"pullRequestCount":2,"issueCount":6,"starsCount":18,"forksCount":5,"license":"GNU General Public License v2.0","participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2019-12-12T11:29:21.724Z"}},{"type":"Public","name":"hicBuildMatrixCpp","owner":"deeptools","isFork":false,"description":"C++ implementation of hicBuildMatrix","allTopics":[],"primaryLanguage":{"name":"C++","color":"#f34b7d"},"pullRequestCount":0,"issueCount":0,"starsCount":2,"forksCount":2,"license":"MIT License","participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2019-10-16T13:02:25.241Z"}},{"type":"Public","name":"docker-hicbrowser","owner":"deeptools","isFork":false,"description":"Docker container for easy deployment of the HiCBrowser","allTopics":[],"primaryLanguage":{"name":"Dockerfile","color":"#384d54"},"pullRequestCount":0,"issueCount":0,"starsCount":0,"forksCount":0,"license":"GNU General Public License v2.0","participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2019-08-11T18:10:04.334Z"}},{"type":"Public","name":"deeptools_intervals","owner":"deeptools","isFork":false,"description":"A python library for constructing interval trees with associated exon/annotation information","allTopics":["bioinformatics","interval-tree","gtf","bed"],"primaryLanguage":{"name":"C","color":"#555555"},"pullRequestCount":0,"issueCount":2,"starsCount":6,"forksCount":2,"license":"MIT License","participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2019-08-07T18:09:17.839Z"}},{"type":"Public","name":"docker-galaxy-hicexplorer","owner":"deeptools","isFork":false,"description":"Galaxy Docker Image for the HiCExplorer","allTopics":[],"primaryLanguage":{"name":"HTML","color":"#e34c26"},"pullRequestCount":0,"issueCount":3,"starsCount":10,"forksCount":3,"license":"MIT License","participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2019-03-03T19:23:28.722Z"}}],"repositoryCount":13,"userInfo":null,"searchable":true,"definitions":[],"typeFilters":[{"id":"all","text":"All"},{"id":"public","text":"Public"},{"id":"source","text":"Sources"},{"id":"fork","text":"Forks"},{"id":"archived","text":"Archived"},{"id":"template","text":"Templates"}],"compactMode":false},"title":"Repositories"}