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document / provide code on how to update anatomical landmarks after coregistration #956

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SophieHerbst opened this issue Jun 11, 2024 · 0 comments

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@SophieHerbst
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We are processing a new dataset, for which we need to do the coregistration after the BIDS import, as we need to first recon-all our mris. If I am not mistaken, we need to run mne_bids.update_anat_landmarks() after obtaining the coregistration. I think this should be documented in the pipeline, or can we even provide a script to do it after the optional freesurfer steps?

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