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Create a segmentation model diagnostic notebook #293

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ant0nsc opened this issue Oct 21, 2020 · 2 comments
Open

Create a segmentation model diagnostic notebook #293

ant0nsc opened this issue Oct 21, 2020 · 2 comments
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reporting and diagnostics Improvements to diagnostics and reporting

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@ant0nsc
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ant0nsc commented Oct 21, 2020

  • Image sizes
  • effect of photometric normalization
  • patch sampling thumbnails

Add average Dice to results notebook

AB#3930

@ant0nsc ant0nsc added this to Backlog in InnerEye via automation Oct 21, 2020
@ant0nsc ant0nsc moved this from Backlog to Current Sprint in InnerEye Oct 21, 2020
@ant0nsc ant0nsc self-assigned this Oct 21, 2020
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ant0nsc commented Oct 21, 2020

Can we maybe even add GPU utilization stats, so that people can increase crop size if there is space?

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ant0nsc commented Oct 21, 2020

We are not always evaluating the model on the full training set, but maybe we can add performance per crop from the last training epochs? Can that give any insights into the quality of the training data?

@ant0nsc ant0nsc moved this from Current Sprint to Backlog in InnerEye Nov 2, 2020
@ant0nsc ant0nsc added the reporting and diagnostics Improvements to diagnostics and reporting label Feb 2, 2021
@ant0nsc ant0nsc removed this from Backlog in InnerEye Feb 3, 2021
@ant0nsc ant0nsc added no changelog needed CHANGELOG.md does not need to be updated in this PR and removed no changelog needed CHANGELOG.md does not need to be updated in this PR labels Apr 9, 2021
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