forked from openmrs/openmrs-core
-
Notifications
You must be signed in to change notification settings - Fork 0
/
startup.sh
135 lines (106 loc) · 5.9 KB
/
startup.sh
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
31
32
33
34
35
36
37
38
39
40
41
42
43
44
45
46
47
48
49
50
51
52
53
54
55
56
57
58
59
60
61
62
63
64
65
66
67
68
69
70
71
72
73
74
75
76
77
78
79
80
81
82
83
84
85
86
87
88
89
90
91
92
93
94
95
96
97
98
99
100
101
102
103
104
105
106
107
108
109
110
111
112
113
114
115
116
117
118
119
120
121
122
123
124
125
126
127
128
129
130
131
132
133
134
135
#!/bin/bash -eu
# This Source Code Form is subject to the terms of the Mozilla Public License,
# v. 2.0. If a copy of the MPL was not distributed with this file, You can
# obtain one at http:https://mozilla.org/MPL/2.0/. OpenMRS is also distributed under
# the terms of the Healthcare Disclaimer located at http:https://openmrs.org/license.
#
# Copyright (C) OpenMRS Inc. OpenMRS is a registered trademark and the OpenMRS
# graphic logo is a trademark of OpenMRS Inc.
echo "Initiating OpenMRS startup"
# This startup script is responsible for fully preparing the OpenMRS Tomcat environment.
OMRS_HOME="/openmrs"
OMRS_WEBAPP_NAME=${OMRS_WEBAPP_NAME:-openmrs}
# A volume mount is expected that contains distribution artifacts. The expected format is shown in these environment vars.
OMRS_DISTRO_DIR="$OMRS_HOME/distribution"
OMRS_DISTRO_CORE="$OMRS_DISTRO_DIR/openmrs_core"
OMRS_DISTRO_MODULES="$OMRS_DISTRO_DIR/openmrs_modules"
OMRS_DISTRO_OWAS="$OMRS_DISTRO_DIR/openmrs_owas"
OMRS_DISTRO_CONFIG="$OMRS_DISTRO_DIR/openmrs_config"
# Each of these mounted directories are used to populate expected configurations on the server, defined here
OMRS_DATA_DIR="$OMRS_HOME/data"
OMRS_MODULES_DIR="$OMRS_DATA_DIR/modules"
OMRS_OWA_DIR="$OMRS_DATA_DIR/owa"
OMRS_CONFIG_DIR="$OMRS_DATA_DIR/configuration"
OMRS_SERVER_PROPERTIES_FILE="$OMRS_HOME/$OMRS_WEBAPP_NAME-server.properties"
OMRS_RUNTIME_PROPERTIES_FILE="$OMRS_DATA_DIR/$OMRS_WEBAPP_NAME-runtime.properties"
TOMCAT_DIR="/usr/local/tomcat"
TOMCAT_WEBAPPS_DIR="$TOMCAT_DIR/webapps"
TOMCAT_WORK_DIR="$TOMCAT_DIR/work"
TOMCAT_TEMP_DIR="$TOMCAT_DIR/temp"
TOMCAT_SETENV_FILE="$TOMCAT_DIR/bin/setenv.sh"
echo "Clearing out existing directories of any previous artifacts"
rm -fR $TOMCAT_WEBAPPS_DIR/*
rm -fR $OMRS_MODULES_DIR/*
rm -fR $OMRS_OWA_DIR/*
rm -fR $OMRS_CONFIG_DIR/*
rm -fR $TOMCAT_WORK_DIR/*
rm -fR $TOMCAT_TEMP_DIR/*
echo "Loading artifacts into appropriate locations"
cp -r $OMRS_DISTRO_CORE/. $TOMCAT_WEBAPPS_DIR
[ -d "$OMRS_DISTRO_MODULES" ] && cp -r $OMRS_DISTRO_MODULES/. $OMRS_MODULES_DIR
[ -d "$OMRS_DISTRO_OWAS" ] && cp -r $OMRS_DISTRO_OWAS/. $OMRS_OWA_DIR
[ -d "$OMRS_DISTRO_CONFIG" ] && cp -r $OMRS_DISTRO_CONFIG/. $OMRS_CONFIG_DIR
# Setup database configuration properties
OMRS_CONFIG_DATABASE="${OMRS_CONFIG_DATABASE:-mysql}"
OMRS_CONFIG_CONNECTION_SERVER="${OMRS_CONFIG_CONNECTION_SERVER:-localhost}"
OMRS_CONFIG_CONNECTION_DATABASE="${OMRS_CONFIG_CONNECTION_DATABASE:-openmrs}"
OMRS_CONFIG_CONNECTION_EXTRA_ARGS="${OMRS_CONFIG_CONNECTION_EXTRA_ARGS-}"
if [[ -z $OMRS_CONFIG_DATABASE || "$OMRS_CONFIG_DATABASE" == "mysql" ]]; then
OMRS_CONFIG_JDBC_URL_PROTOCOL=mysql
OMRS_CONFIG_CONNECTION_DRIVER_CLASS="${OMRS_CONFIG_CONNECTION_DRIVER_CLASS:-com.mysql.jdbc.Driver}"
OMRS_CONFIG_CONNECTION_PORT="${OMRS_CONFIG_CONNECTION_PORT:-3306}"
OMRS_CONFIG_CONNECTION_ARGS="${OMRS_CONFIG_CONNECTION_ARGS:-?autoReconnect=true&sessionVariables=default_storage_engine=InnoDB&useUnicode=true&characterEncoding=UTF-8}"
elif [[ "$OMRS_CONFIG_DATABASE" == "postgresql" ]]; then
OMRS_CONFIG_JDBC_URL_PROTOCOL=postgresql
OMRS_CONFIG_CONNECTION_DRIVER_CLASS="${OMRS_CONFIG_CONNECTION_DRIVER_CLASS:-org.postgresql.Driver}"
OMRS_CONFIG_CONNECTION_PORT="${OMRS_CONFIG_CONNECTION_PORT:-5432}"
else
echo "Unknown database type $OMRS_CONFIG_DATABASE. Using properties for MySQL"
OMRS_CONFIG_JDBC_URL_PROTOCOL=mysql
OMRS_CONFIG_CONNECTION_DRIVER_CLASS="${OMRS_CONFIG_CONNECTION_DRIVER_CLASS:-com.mysql.jdbc.Driver}"
OMRS_CONFIG_CONNECTION_PORT="${OMRS_CONFIG_CONNECTION_PORT:-3306}"
OMRS_CONFIG_CONNECTION_ARGS="${OMRS_CONFIG_CONNECTION_ARGS:-?autoReconnect=true&sessionVariables=default_storage_engine=InnoDB&useUnicode=true&characterEncoding=UTF-8}"
fi
# Build the JDBC URL using the above properties
OMRS_CONFIG_CONNECTION_URL="${OMRS_CONFIG_CONNECTION_URL:-jdbc:${OMRS_CONFIG_JDBC_URL_PROTOCOL}:https://${OMRS_CONFIG_CONNECTION_SERVER}:${OMRS_CONFIG_CONNECTION_PORT}/${OMRS_CONFIG_CONNECTION_DATABASE}${OMRS_CONFIG_CONNECTION_ARGS}${OMRS_CONFIG_CONNECTION_EXTRA_ARGS}}"
echo "Writing out $OMRS_SERVER_PROPERTIES_FILE"
cat > $OMRS_SERVER_PROPERTIES_FILE << EOF
add_demo_data=${OMRS_CONFIG_ADD_DEMO_DATA}
admin_user_password=${OMRS_CONFIG_ADMIN_USER_PASSWORD}
auto_update_database=${OMRS_CONFIG_AUTO_UPDATE_DATABASE}
connection.driver_class=${OMRS_CONFIG_CONNECTION_DRIVER_CLASS}
connection.username=${OMRS_CONFIG_CONNECTION_USERNAME}
connection.password=${OMRS_CONFIG_CONNECTION_PASSWORD}
connection.url=${OMRS_CONFIG_CONNECTION_URL}
create_database_user=${OMRS_CONFIG_CREATE_DATABASE_USER}
create_tables=${OMRS_CONFIG_CREATE_TABLES}
has_current_openmrs_database=${OMRS_CONFIG_HAS_CURRENT_OPENMRS_DATABASE}
install_method=${OMRS_CONFIG_INSTALL_METHOD}
module_web_admin=${OMRS_CONFIG_MODULE_WEB_ADMIN}
module.allow_web_admin=${OMRS_CONFIG_MODULE_WEB_ADMIN}
EOF
if [ -f $OMRS_RUNTIME_PROPERTIES_FILE ]; then
echo "Found existing runtime properties file at $OMRS_RUNTIME_PROPERTIES_FILE. Overwriting with $OMRS_SERVER_PROPERTIES_FILE"
cp $OMRS_SERVER_PROPERTIES_FILE $OMRS_RUNTIME_PROPERTIES_FILE
fi
echo "Writing out $TOMCAT_SETENV_FILE file"
JAVA_OPTS="$OMRS_JAVA_SERVER_OPTS"
CATALINA_OPTS="$OMRS_JAVA_MEMORY_OPTS -DOPENMRS_INSTALLATION_SCRIPT=$OMRS_SERVER_PROPERTIES_FILE -DOPENMRS_APPLICATION_DATA_DIRECTORY=$OMRS_DATA_DIR/"
if [ -n "${OMRS_DEV_DEBUG_PORT-}" ]; then
echo "Enabling debugging on port $OMRS_DEV_DEBUG_PORT"
CATALINA_OPTS="$CATALINA_OPTS -agentlib:jdwp=transport=dt_socket,server=y,suspend=n,address=$OMRS_DEV_DEBUG_PORT"
fi
cat > $TOMCAT_SETENV_FILE << EOF
export JAVA_OPTS="$JAVA_OPTS"
export CATALINA_OPTS="$CATALINA_OPTS"
EOF
echo "Waiting for database to initialize..."
/usr/local/tomcat/wait-for-it.sh --timeout=3600 "${OMRS_CONFIG_CONNECTION_SERVER}:${OMRS_CONFIG_CONNECTION_PORT}"
echo "Starting up OpenMRS..."
/usr/local/tomcat/bin/catalina.sh run &
# Trigger first filter to start data importation
sleep 15
curl -sL "http:https://localhost:8080/$OMRS_WEBAPP_NAME/" > /dev/null
sleep 15
# bring tomcat process to foreground again
wait ${!}