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.travis.yml
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.travis.yml
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os: linux
dist: xenial
cache: pip
language: python
python:
- "3.8"
install:
- wget https://repo.continuum.io/miniconda/Miniconda3-latest-Linux-x86_64.sh -O miniconda.sh;
- bash miniconda.sh -b -p $HOME/miniconda
- export PATH="$HOME/miniconda/bin:$PATH"
- hash -r
- conda config --set always_yes yes --set changeps1 no
- conda update -q conda
- conda info -a
- conda create -q -n test-env python=$TRAVIS_PYTHON_VERSION
- source activate test-env
- pip install --upgrade pip setuptools wheel
- pip install -q -r requirements.txt
- conda install -c conda-forge rdkit
- pip install biopython
- conda install -c conda-forge mdtraj
- conda install --yes -c plotly plotly-orca
before_script:
- export PYTHONPATH=$PYTHONPATH:$(pwd)
script:
- |
set -e
for n in */*.ipynb
do
travis_wait 180 jupyter nbconvert --to notebook --execute $n
done
env:
- GEOMSTATS_BACKEND=numpy