ELPH
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ELPH ------------------------------------------ ELPH is a general-purpose Gibbs sampler for finding motifs in a set of DNA or protein sequences. The program takes as input a set containing anywhere from a few dozen to thousands of sequences, and searches through them for the most common motif, assuming that each sequence contains one copy of the motif. Runtime requirements: cygwin-1.7.9-1 libstdc++6-4.5.3-2 Build requirements: (besides corresponding -devel packages) binutils-2.21.53-2 cygport-0.10.5-1 gcc4-core-4.5.3-2 gcc4-g++-4.5.3-2 make-3.81-2 Canonical website: https://www.cbcb.umd.edu/software/ELPH/ Canonical download: ftp:https://ftp.cbcb.umd.edu/pub/software/elph/ELPH-1.0.1.tar.gz ------------------------------------------- Build instructions: unpack ELPH-1.0.1-X-src.tar.bz2 if you use setup to install this src package, it will be unpacked under /usr/src automatically cd /usr/src cygport ./ELPH-1.0.1-X.cygport all This will create: /usr/src/ELPH-1.0.1-X-src.tar.bz2 /usr/src/ELPH-1.0.1-X.tar.bz2 ------------------------------------------- Files included in the binary package: (ELPH) /usr/bin/elph.exe /usr/share/doc/Cygwin/ELPH.README /usr/share/doc/ELPH/COPYRIGHT /usr/share/doc/ELPH/LICENSE /usr/share/doc/ELPH/README /usr/share/doc/ELPH/Readme.ELPH /usr/share/doc/ELPH/VERSION ------------------ Port Notes: ----- version 1.0.1-1bl1 ----- Initial release for Cygwin-1.7 by fd0 <https://d.hatena.ne.jp/fd0>